Function Annotation for BL190929



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Receptor

Assembly ID: 5dtd_1

Stoichiometry type: Hetero 2-mer -A1B1
Assembly defined by: Author and software
PDB ID: 5dtd
Experimental method: X-RAY DIFFRACTION
Resolution: 2.642 Å
UniProt ID: P0A6R3
PubMed ID: 26959646

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA C:DNA D:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=2.1nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 11372.87
Surface area of ligand 9786.72
Surface area of complex 19193.2
Interface area 983.19

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)