Function Annotation for BL190894



                                                                                          Spin

Receptor

Assembly ID: 5ds9_1

Stoichiometry type: Hetero 2-mer -A1B1
Assembly defined by: Author and software
PDB ID: 5ds9
Experimental method: X-RAY DIFFRACTION
Resolution: 2.561 Å
UniProt ID: P0A6R3
PubMed ID: 26959646

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

Download

  

Ligand ID NUC pairing details Name
DNA C:DNA D:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=0.7nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 11208.97
Surface area of ligand 9836.7
Surface area of complex 19026.27
Interface area 1009.7

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)