Function Annotation for BL183333



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Receptor

Assembly ID: 5d9y_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author and software
PDB ID: 5d9y
Experimental method: X-RAY DIFFRACTION
Resolution: 1.971 Å
UniProt ID: Q6N021
PubMed ID: 26524525

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA B:DNA C:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=0.9uM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 19329.49
Surface area of ligand 5076.08
Surface area of complex 22060.31
Interface area 1172.63

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)