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Yang Lab
Function Annotation for BL173931
3D View
Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
A66:
Q117 K156 D157 L160 H161 Y164
A67:
Q117
A88:
V53 A54
A89:
N121 R122 E125
Residue numbering in PDB file:
A66:
Q117 K156 D157 L160 H161 Y164
A67:
Q117
A88:
V53 A54
A89:
N121 R122 E125
Receptor
Assembly ID: 5a79_1
Stoichiometry type
: Homo 111-mer -A111
Assembly defined by
: Author
PDB ID
:
5a79
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.1 Å
UniProt ID
:
P04866
PubMed ID
:
26278173
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
B66:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
1135.33
Surface area of complex(A
2
)
1135.33
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)