Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL173891
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue numbering in mmCIF file:
A19:
Q117 K156 D157 L160 H161 Y164
A20:
Q117
A41:
V53 A54 R128
A42:
N121 R122 E125
Residue numbering in PDB file:
A19:
Q117 K156 D157 L160 H161 Y164
A20:
Q117
A41:
V53 A54 R128
A42:
N121 R122 E125
Receptor
Assembly ID: 5a79_1
Stoichiometry type
: Homo 111-mer -A111
Assembly defined by
: Author
PDB ID
:
5a79
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.1 Å
UniProt ID
:
P04866
PubMed ID
:
26278173
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
B19:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
1135.31
Surface area of complex(A
2
)
1135.31
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)