Function Annotation for BL162346



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Receptor

Assembly ID: 4y60_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author and software
PDB ID: 4y60
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
UniProt ID: P43680
PubMed ID: 26939885

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA B:DNA C:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=6.1nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 6668.31
Surface area of ligand 6478.67
Surface area of complex 10713.64
Interface area 1216.67

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)