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Yang Lab
Function Annotation for BL138134
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Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
J15:
E52 K53
Residue numbering in PDB file:
SL15:
E52 K53
Receptor
Assembly ID: 4v3p_1
Stoichiometry type
: Hetero 1725-mer
Assembly defined by
: Author and software
PDB ID
:
4v3p
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 34.0 Å
UniProt ID
:
Q5I7K3
Q8L805
Q5I7K6
Q5I7K4
A0A9R1H1R6
Q5I7L3
Q5I7L2
Q5I7L1
Q5I7K7
Q5I7L0
Q7X744
Q7XY20
Q8LNY6
W5AP46
Q8L804
Q5I7K5
Q5I7L4
Q5I7K9
Q5I7K8
D8L9P6
PubMed ID
:
25376914
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
DA15:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
3035.32
Surface area of complex(A
2
)
3035.32
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)