Function Annotation for BL12181




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Receptor

Assembly ID: 1hp5_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1hp5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
UniProt ID: O85361
PubMed ID: 11124970

Ligand

Ligand ID: NGT
Ligand name: 3ar,5r,6s,7r,7ar-5-hydroxymethyl-2-methyl-5,6,7,7a-tetrahydro-3ah-pyrano[3,2-d]thiazole-6,7-diol
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
NGT 3ar,5r,6s,7r,7ar-5-hydroxymethyl-2-methyl-5,6,7,7a-tetrahydro-3ah-pyrano[3,2-d]thiazole-6,7-diol "C8 H13 N O4 S" N/A


Binding affinity

Experimental affinity Ki=20000 nm, from BindingDB
Ki=280nM, from PDBbind-CN
Predicted affinity 1.71 uM, show detail

Surface area (A2)

Surface area of receptor 17831.25
Surface area of ligand 358.94
Surface area of complex 17733.19
Interface area 228.5
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)