Information for ligand TYD

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sdf, pdb, mol, mol2


Ligand Name: Dtdp


Synonyms

1 Thymidine-diphosphate
2 Thymidine-5'-diphosphate
3 Thymidine 5'-(trihydrogen diphosphate) (9ci)
4 Dtdp trianion
5 Deoxythymidine 5'-diphosphate
6 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate)
7 Thymidine 5'-diphosphate
8 Thymidine 5'-(trihydrogen diphosphate)
9 Thymidine 5'-pyrophosphate
10 Deoxy-tdp
11 Thymidine-5'- diphosphate

Chemical Component Summary

Formula "C10 H16 N2 O11 P2"
Molecular Weight 402.188
SMILES CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P@@](O)(=O)O[P](O)(O)=O)O2)C(=O)NC1=O
InchI InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1
InChIkey UJLXYODCHAELLY-XLPZGREQSA-N
DrugBank Reference DB03103
ChEBI Reference 18075
PubChem Reference 164628

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)