Information for ligand NEX

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sdf, pdb, mol, mol2


Ligand Name: All-trans-neoxanthin


Synonyms

1 Neoxanthin
2 (3s,5r,6r,3's,5'r,6's)-6,7-didehydro-5',6'-epoxy-5,6,5',6'-tetrahydro-beta,beta-carotene-3,5,3'-triol
3 (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol
4 (3s,5r,6r,3's,5'r,6's)-5',6'-epoxy-6,7-didehydro- 5,6,5',6'-tetrahydro-beta,beta-carotene-3,5,3'-triol
5 9'-cis-neoxanthin

Chemical Component Summary

Formula "C40 H56 O4"
Molecular Weight 600.870
SMILES CC(=C/C=C/C=C(C)/C=C/C=C(C)/[CH]=[C@@]=[C]1C(C)(C)C[C@H](O)C[C@@]1(C)O)C=CC=C(C)/C=C/[C@@]23O[C@]2(C)C[C@@H](O)CC3(C)C
InchI InChI=1S/C40H56O4/c1-29(17-13-19-31(3)21-22-35-36(5,6)25-33(41)27-38(35,9)43)15-11-12-16-30(2)18-14-20-32(4)23-24-40-37(7,8)26-34(42)28-39(40,10)44-40/h11-21,23-24,33-34,41-43H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,24-23+,29-15+,30-16+,31-19+,32-20-/t22-,33-,34-,38+,39+,40-/m0/s1
InChIkey PGYAYSRVSAJXTE-OQASCVKESA-N
DrugBank Reference N/A
ChEBI Reference N/A
PubChem Reference N/A

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)