Information for ligand GPP

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sdf, pdb, mol, mol2


Ligand Name: Geranyl diphosphate(3-)


Synonyms

1 Geranyl diphosphate
2 Geranyl pyrophosphate
3 (2e)-3,7-dimethylocta-2,6-dien-1-yl diphosphate
4 (2e)-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate
5 Polyisopentenylpyrophosphate
6 Polyisopentenyldiphosphate
7 Trans-polyisopentenyldiphosphate
8 Polyprenyl diphosphate
9 Alpha-(3-methylbut-2-en-1-yl)-omega-{[hydroxy(phosphonooxy)phosphoryl]oxy}poly[(2e)-2-methylbut-2-ene-1,4-diyl]

Chemical Component Summary

Formula "C10 H20 O7 P2"
Molecular Weight 314.209
SMILES CC(C)=CCCC(/C)=C/CO[P@](O)(=O)O[P](O)(O)=O
InchI InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+
InChIkey GVVPGTZRZFNKDS-JXMROGBWSA-N
DrugBank Reference DB02552
ChEBI Reference 17211 55337
PubChem Reference 445995

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)