Information for ligand DOQ

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sdf, pdb, mol, mol2


Ligand Name: Domoic acid


Synonyms

1 L-domoic acid
2 3-pyrrolidineacetic acid
3 2-carboxy-4-(5-carboxy-1-methyl-1,3-hexadienyl)-
4 (2s,3s,4s)-2-carboxy-4-[(1z,3e,5r)-5-carboxy-1-methyl-1,3-hexadienyl]-3-pyrrolidineacetic acid
5 (2s,3s,4s)-3-carboxymethyl-4-[(1z,3e,5r)-5-carboxy-1-methyl-hexa-1,3-dienyl]-pyrrolidine-2-carboxylic acid
6 (3s,4s)-4-[(2z,4e,6r)-6-carboxyhepta-2,4-dien-2-yl]-3-(carboxymethyl)-l-proline

Chemical Component Summary

Formula "C15 H21 N O6"
Molecular Weight 311.330
SMILES C[C@H](C=CC=C(C)[C@H]1CN[C@@H]([C@H]1CC(O)=O)C(O)=O)C(O)=O
InchI InChI=1S/C15H21NO6/c1-8(4-3-5-9(2)14(19)20)11-7-16-13(15(21)22)10(11)6-12(17)18/h3-5,9-11,13,16H,6-7H2,1-2H3,(H,17,18)(H,19,20)(H,21,22)/b5-3+,8-4-/t9-,10+,11-,13+/m1/s1
InChIkey VZFRNCSOCOPNDB-AOKDLOFSSA-N
DrugBank Reference DB02852
ChEBI Reference 34727
PubChem Reference 5282253

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)