Information for ligand CDP

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sdf, pdb, mol, mol2


Ligand Name: Cdp


Synonyms

1 5'-cdp
2 Cytidine 5'-(trihydrogen diphosphate)
3 Cytidine, 5'-(trihydrogen pyrophosphate)
4 Cytidine 5'-diphosphoric acid
5 Cytidine 5'-pyrophosphate
6 Cytidine diphosphate
7 Cytidine 5'-diphosphate
8 Cytidine-5'-diphosphate

Chemical Component Summary

Formula "C9 H15 N3 O11 P2"
Molecular Weight 403.176
SMILES NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O
InchI InChI=1S/C9H15N3O11P2/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIkey ZWIADYZPOWUWEW-XVFCMESISA-N
DrugBank Reference DB04555
ChEBI Reference 17239
PubChem Reference 6132

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)