Job ID: mTM002040
 
Query Structure Name: query
 
Database: Domain, ~475k domains from PDB (version 2017-11-18) and SCOPe (version 2.06)
 
     The percentage of non-gap positions in the alignments.
The residues are shown in colors going from blue through green to red, where blue represents no gap and red means full gaps.

Below are the list of structures that have similar structures to the query in the database. You can:
  • Download the search result in csv format
  • View the automated MSTA with the top 10 subjects

  • Select up to 30 structures from the list on the same page and then click on the 'Run mTM-align' button to generate a MSTA for them.

    query (80 residues)
    Keep my results private (check this box if you want to keep your job private. A key will be assigned for you to access the results)

         

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    Reference

  • R Dong, S Pan, Z Peng, Y Zhang, J Yang, mTM-align: a server for fast protein structure database search and multiple protein structure alignment, Nucleic Acids Research, 46: W380–W386 (2018).
  • R Dong, Z Peng, Y Zhang, J Yang, mTM-align: an algorithm for fast and accurate multiple protein structure alignment, Bioinformatics, 34: 1719-1725 (2018).