Q-SITE results for job QS000120 (your_protein)

Input: submitted protein   submitted ligand           Output: Download all results
Predicted models
spin
Current model information
Protein

CScore: 0.70

Cluster size: 155

Protein template: 1A6W_1

Predict Binding site: A: Y33 W92 W97 B: W33 H35 R50 K59 Y99 S105

Poset

Ligand template: NIP

Sequence

Chain A     AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLE Chain B     QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS


Rank CScore P template Cluster size L template Predicted binding residues Poset Poseu
1 0.70 1A6W_1 155 NIP A: Y33 W92 W97 B: W33 H35 R50 K59 Y99 S105
2 0.66 5XCR_2 91 PEPTIDE A: Y33 N35 W92 B: S31 W33 H35 R50 Y99 S105
3 0.65 1NC2_2 67 DOE B: S31 W33 R50 D52 G57 K59 Y99 Y101 S105
4 0.64 1SM3_1 61 PEPTIDE A: Y33 N35 G51 W92 W97 B: S31 Y32 W33 R50 Y99 D100 S105 Y106
5 0.63 2C1P_2 61 FNZ A: Y33 N35 A90 W92 W97 F99 B: H35 V37 R50 A97 Y99 Y101 S105 W110

   Summary for ligands in the first-ranked prediciton above

Rank Ligand Frequency PDB template

Visualizaiton

1 AZN 12 1OAR_1, 1OAR_2, 1OAR_3, 1OAR_4
2 HAN 9 1Y0L_1, 1Y0L_2, 1Y0L_3, 1Y0L_4, 1Y18_1,
1Y18_2, 1Y18_3, 1Y18_4
3 kmer 8 1MFD_1, 1MFE_1, 1UZ8_2, 1UZ8_3
Others OHM(8), HAL(7), 7V7(7), OOX(6), DNF(6), PG4(6), FUR(6), MOI(5), ANF(4), ANQ(4), ECO(4), 41M(3), NIP(3), NPC(3), EDO(3),
NPA(3), HOP(2), NCT(2), GOL(2), EOT(2), QI9(2), OOW(2), XPG(1), MBT(1), AB0(1), CIT(1), ON5(1), GAS(1), TRS(1), SO4(1),
P2E(1), PME(1), PO4(1),

Reference

Wei et al,Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein-ligand Interactions,Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)