Q-BioLiP BL3290810

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data_1qfi_1
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1   N N     . THR A 1 1  ? 11.392 9.724  11.722 1.00 2.74  ? 1  THR A N     1
HETATM 2   C CA    . THR A 1 1  ? 12.473 9.091  11.007 1.00 2.60  ? 1  THR A CA    1
HETATM 3   C C     . THR A 1 1  ? 12.872 10.017 9.827  1.00 2.66  ? 1  THR A C     1
HETATM 4   O O     . THR A 1 1  ? 12.093 10.861 9.395  1.00 3.49  ? 1  THR A O     1
HETATM 5   C CB    . THR A 1 1  ? 12.108 7.729  10.378 1.00 2.66  ? 1  THR A CB    1
HETATM 6   O OG1   . THR A 1 1  ? 11.069 8.023  9.365  1.00 2.98  ? 1  THR A OG1   1
HETATM 7   C CG2   . THR A 1 1  ? 11.545 6.707  11.343 1.00 3.28  ? 1  THR A CG2   1
HETATM 8   N N     . DVA A 1 2  ? 14.058 9.720  9.281  1.00 2.94  ? 2  DVA A N     1
HETATM 9   C CA    . DVA A 1 2  ? 14.430 10.177 7.933  1.00 3.45  ? 2  DVA A CA    1
HETATM 10  C CB    . DVA A 1 2  ? 15.432 9.204  7.284  1.00 4.28  ? 2  DVA A CB    1
HETATM 11  C CG1   . DVA A 1 2  ? 14.946 7.740  7.388  1.00 4.68  ? 2  DVA A CG1   1
HETATM 12  C CG2   . DVA A 1 2  ? 15.640 9.589  5.812  1.00 5.95  ? 2  DVA A CG2   1
HETATM 13  C C     . DVA A 1 2  ? 15.053 11.573 7.984  1.00 4.22  ? 2  DVA A C     1
HETATM 14  O O     . DVA A 1 2  ? 16.156 11.735 8.526  1.00 4.62  ? 2  DVA A O     1
HETATM 15  N N     . DPL A 1 3  ? 14.408 12.595 7.388  1.00 4.90  ? 3  DPL A N     1
HETATM 16  C CA    . DPL A 1 3  ? 13.032 12.590 6.892  1.00 4.69  ? 3  DPL A CA    1
HETATM 17  C C     . DPL A 1 3  ? 12.988 11.976 5.485  1.00 5.32  ? 3  DPL A C     1
HETATM 18  O O     . DPL A 1 3  ? 13.861 12.322 4.671  1.00 7.48  ? 3  DPL A O     1
HETATM 19  C CB    . DPL A 1 3  ? 12.654 14.079 6.813  1.00 5.98  ? 3  DPL A CB    1
HETATM 20  C CG    . DPL A 1 3  ? 13.947 14.821 6.861  1.00 11.73 ? 3  DPL A CG    1
HETATM 21  C CD    . DPL A 1 3  ? 15.032 13.898 7.273  1.00 7.50  ? 3  DPL A CD    1
HETATM 22  O OG1   . DPL A 1 3  ? 14.060 15.986 6.673  1.00 26.80 ? 3  DPL A OG1   1
HETATM 23  N N     . SAR A 1 4  ? 12.006 11.132 5.160  1.00 5.10  ? 4  SAR A N     1
HETATM 24  C CA    . SAR A 1 4  ? 10.860 10.795 5.993  1.00 4.55  ? 4  SAR A CA    1
HETATM 25  C C     . SAR A 1 4  ? 10.880 9.335  6.467  1.00 3.82  ? 4  SAR A C     1
HETATM 26  O O     . SAR A 1 4  ? 11.869 8.625  6.286  1.00 4.16  ? 4  SAR A O     1
HETATM 27  C CN    . SAR A 1 4  ? 11.989 10.600 3.779  1.00 6.71  ? 4  SAR A CN    1
HETATM 28  N N     . MVA A 1 5  ? 9.772  8.870  7.074  1.00 3.81  ? 5  MVA A N     1
HETATM 29  C CN    . MVA A 1 5  ? 8.651  9.706  7.475  1.00 5.22  ? 5  MVA A CN    1
HETATM 30  C CA    . MVA A 1 5  ? 9.741  7.452  7.494  1.00 3.75  ? 5  MVA A CA    1
HETATM 31  C CB    . MVA A 1 5  ? 9.613  6.457  6.308  1.00 4.38  ? 5  MVA A CB    1
HETATM 32  C CG1   . MVA A 1 5  ? 8.679  7.003  5.235  1.00 5.41  ? 5  MVA A CG1   1
HETATM 33  C CG2   . MVA A 1 5  ? 9.046  5.132  6.823  1.00 6.50  ? 5  MVA A CG2   1
HETATM 34  C C     . MVA A 1 5  ? 10.945 7.108  8.378  1.00 3.34  ? 5  MVA A C     1
HETATM 35  O O     . MVA A 1 5  ? 11.624 6.118  8.278  1.00 4.61  ? 5  MVA A O     1
HETATM 36  C C1    . PXZ A 1 6  ? 10.006 10.256 13.641 1.00 2.78  ? 6  PXZ A C1    1
HETATM 37  C C0    . PXZ A 1 6  ? 11.149 9.512  13.040 1.00 2.62  ? 6  PXZ A C0    1
HETATM 38  O O1    . PXZ A 1 6  ? 11.772 8.651  13.668 1.00 2.94  ? 6  PXZ A O1    1
HETATM 39  C C2    . PXZ A 1 6  ? 9.217  9.623  14.611 1.00 2.88  ? 6  PXZ A C2    1
HETATM 40  N N2    . PXZ A 1 6  ? 9.518  8.469  15.196 1.00 3.22  ? 6  PXZ A N2    1
HETATM 41  C C3    . PXZ A 1 6  ? 7.916  10.226 15.089 1.00 3.10  ? 6  PXZ A C3    1
HETATM 42  O O3    . PXZ A 1 6  ? 7.208  9.583  15.870 1.00 3.88  ? 6  PXZ A O3    1
HETATM 43  C C4    . PXZ A 1 6  ? 7.540  11.532 14.587 1.00 3.38  ? 6  PXZ A C4    1
HETATM 44  O O5    . PXZ A 1 6  ? 8.060  13.421 13.332 1.00 3.55  ? 6  PXZ A O5    1
HETATM 45  C C6    . PXZ A 1 6  ? 8.556  15.469 12.300 1.00 3.91  ? 6  PXZ A C6    1
HETATM 46  C C7    . PXZ A 1 6  ? 9.481  16.263 11.632 1.00 4.28  ? 6  PXZ A C7    1
HETATM 47  C C8    . PXZ A 1 6  ? 10.751 15.772 11.254 1.00 3.96  ? 6  PXZ A C8    1
HETATM 48  C C9    . PXZ A 1 6  ? 11.112 14.456 11.554 1.00 3.24  ? 6  PXZ A C9    1
HETATM 49  C "C0'" . PXZ A 1 6  ? 12.444 13.996 11.018 1.00 3.29  ? 6  PXZ A "C0'" 1
HETATM 50  O "O1'" . PXZ A 1 6  ? 12.732 14.277 9.846  1.00 4.55  ? 6  PXZ A "O1'" 1
HETATM 51  N N10   . PXZ A 1 6  ? 10.514 12.321 12.537 1.00 2.95  ? 6  PXZ A N10   1
HETATM 52  C C11   . PXZ A 1 6  ? 9.673  11.606 13.260 1.00 2.76  ? 6  PXZ A C11   1
HETATM 53  C C12   . PXZ A 1 6  ? 8.419  12.173 13.765 1.00 3.22  ? 6  PXZ A C12   1
HETATM 54  C C13   . PXZ A 1 6  ? 8.966  14.180 12.630 1.00 3.36  ? 6  PXZ A C13   1
HETATM 55  C C14   . PXZ A 1 6  ? 10.209 13.646 12.260 1.00 2.97  ? 6  PXZ A C14   1
HETATM 56  C C15   . PXZ A 1 6  ? 6.235  12.159 15.035 1.00 4.45  ? 6  PXZ A C15   1
HETATM 57  C C16   . PXZ A 1 6  ? 7.167  15.954 12.676 1.00 5.21  ? 6  PXZ A C16   1
HETATM 58  N N     . THR A 1 7  ? 13.303 13.369 11.828 1.00 3.23  ? 7  THR A N     1
HETATM 59  C CA    . THR A 1 7  ? 14.615 12.972 11.325 1.00 3.48  ? 7  THR A CA    1
HETATM 60  C C     . THR A 1 7  ? 15.095 11.698 11.997 1.00 2.99  ? 7  THR A C     1
HETATM 61  O O     . THR A 1 7  ? 14.665 11.274 13.075 1.00 3.60  ? 7  THR A O     1
HETATM 62  C CB    . THR A 1 7  ? 15.696 14.041 11.557 1.00 5.26  ? 7  THR A CB    1
HETATM 63  O OG1   . THR A 1 7  ? 15.973 14.044 12.985 1.00 5.44  ? 7  THR A OG1   1
HETATM 64  C CG2   . THR A 1 7  ? 15.329 15.447 11.114 1.00 6.88  ? 7  THR A CG2   1
HETATM 65  N N     . DVA A 1 8  ? 16.126 11.107 11.336 1.00 3.16  ? 8  DVA A N     1
HETATM 66  C CA    . DVA A 1 8  ? 16.964 10.070 11.935 1.00 2.95  ? 8  DVA A CA    1
HETATM 67  C CB    . DVA A 1 8  ? 18.276 9.955  11.122 1.00 4.11  ? 8  DVA A CB    1
HETATM 68  C CG1   . DVA A 1 8  ? 19.220 8.935  11.776 1.00 5.36  ? 8  DVA A CG1   1
HETATM 69  C CG2   . DVA A 1 8  ? 18.980 11.310 11.026 1.00 5.66  ? 8  DVA A CG2   1
HETATM 70  C C     . DVA A 1 8  ? 16.245 8.720  11.948 1.00 2.95  ? 8  DVA A C     1
HETATM 71  O O     . DVA A 1 8  ? 15.916 8.182  10.869 1.00 4.05  ? 8  DVA A O     1
HETATM 72  N N     . PRO A 1 9  ? 16.038 8.118  13.121 1.00 3.26  ? 9  PRO A N     1
HETATM 73  C CA    . PRO A 1 9  ? 16.043 8.751  14.441 1.00 3.46  ? 9  PRO A CA    1
HETATM 74  C C     . PRO A 1 9  ? 17.435 8.779  15.074 1.00 3.63  ? 9  PRO A C     1
HETATM 75  O O     . PRO A 1 9  ? 18.257 7.919  14.799 1.00 4.03  ? 9  PRO A O     1
HETATM 76  C CB    . PRO A 1 9  ? 15.147 7.790  15.261 1.00 5.58  ? 9  PRO A CB    1
HETATM 77  C CG    . PRO A 1 9  ? 15.443 6.451  14.653 1.00 5.69  ? 9  PRO A CG    1
HETATM 78  C CD    . PRO A 1 9  ? 15.482 6.738  13.161 1.00 4.87  ? 9  PRO A CD    1
HETATM 79  N N     . SAR A 1 10 ? 17.697 9.738  15.982 1.00 4.52  ? 10 SAR A N     1
HETATM 80  C CA    . SAR A 1 10 ? 16.852 10.909 16.193 1.00 5.43  ? 10 SAR A CA    1
HETATM 81  C C     . SAR A 1 10 ? 17.274 12.057 15.301 1.00 5.34  ? 10 SAR A C     1
HETATM 82  O O     . SAR A 1 10 ? 18.143 11.909 14.439 1.00 5.35  ? 10 SAR A O     1
HETATM 83  C CN    . SAR A 1 10 ? 19.019 9.764  16.592 1.00 5.71  ? 10 SAR A CN    1
HETATM 84  N N     . MVA A 1 11 ? 16.713 13.255 15.552 1.00 6.32  ? 11 MVA A N     1
HETATM 85  C CN    . MVA A 1 11 ? 15.592 13.429 16.512 1.00 7.74  ? 11 MVA A CN    1
HETATM 86  C CA    . MVA A 1 11 ? 17.323 14.438 14.904 1.00 7.54  ? 11 MVA A CA    1
HETATM 87  C CB    . MVA A 1 11 ? 18.701 14.742 15.462 1.00 9.79  ? 11 MVA A CB    1
HETATM 88  C CG1   . MVA A 1 11 ? 18.728 14.479 17.019 1.00 16.14 ? 11 MVA A CG1   1
HETATM 89  C CG2   . MVA A 1 11 ? 19.095 16.135 15.166 1.00 11.46 ? 11 MVA A CG2   1
HETATM 90  C C     . MVA A 1 11 ? 17.226 14.350 13.380 1.00 6.65  ? 11 MVA A C     1
HETATM 91  O O     . MVA A 1 11 ? 18.114 14.605 12.622 1.00 8.50  ? 11 MVA A O     1
HETATM 276 C C1    . EEE D 2 .  ? 13.202 19.768 10.591 1.00 6.06  ? 34 EEE A C1    1
HETATM 277 C C2    . EEE D 2 .  ? 14.224 18.805 10.424 1.00 7.59  ? 34 EEE A C2    1
HETATM 278 O O1    . EEE D 2 .  ? 11.961 19.494 10.716 1.00 9.83  ? 34 EEE A O1    1
HETATM 279 O O2    . EEE D 2 .  ? 13.605 21.018 10.536 1.00 7.33  ? 34 EEE A O2    1
HETATM 280 C C3    . EEE D 2 .  ? 12.654 22.110 10.628 1.00 6.40  ? 34 EEE A C3    1
HETATM 281 C C4    . EEE D 2 .  ? 13.336 23.264 11.281 1.00 7.45  ? 34 EEE A C4    1
HETATM 282 C C1    . EEE E 2 .  ? 9.928  21.833 6.730  1.00 9.87  ? 35 EEE A C1    1
HETATM 283 C C2    . EEE E 2 .  ? 9.772  21.801 5.338  1.00 11.81 ? 35 EEE A C2    1
HETATM 284 O O1    . EEE E 2 .  ? 10.953 22.195 7.458  1.00 13.37 ? 35 EEE A O1    1
HETATM 285 O O2    . EEE E 2 .  ? 8.826  21.592 7.453  1.00 13.42 ? 35 EEE A O2    1
HETATM 286 C C3    . EEE E 2 .  ? 8.979  21.674 8.889  1.00 17.67 ? 35 EEE A C3    1
HETATM 287 C C4    . EEE E 2 .  ? 8.215  20.672 9.565  1.00 20.21 ? 35 EEE A C4    1
HETATM 288 C C1    A EEE F 2 .  ? 18.146 18.167 7.961  0.50 13.71 ? 37 EEE A C1    1
HETATM 289 C C2    A EEE F 2 .  ? 18.150 18.454 6.605  0.50 15.62 ? 37 EEE A C2    1
HETATM 290 O O1    A EEE F 2 .  ? 17.183 17.609 8.667  0.50 23.39 ? 37 EEE A O1    1
HETATM 291 O O2    A EEE F 2 .  ? 19.303 18.239 8.605  0.50 11.42 ? 37 EEE A O2    1
HETATM 292 C C3    A EEE F 2 .  ? 19.222 18.134 10.058 0.50 15.21 ? 37 EEE A C3    1
HETATM 293 C C4    A EEE F 2 .  ? 20.392 18.785 10.659 0.50 16.74 ? 37 EEE A C4    1
HETATM 294 C C1    B EEE G 2 .  ? 20.109 18.760 10.427 0.50 13.36 ? 38 EEE A C1    1
HETATM 295 C C2    B EEE G 2 .  ? 20.472 19.811 9.608  0.50 14.93 ? 38 EEE A C2    1
HETATM 296 O O1    B EEE G 2 .  ? 20.200 18.746 11.748 0.50 17.49 ? 38 EEE A O1    1
HETATM 297 O O2    B EEE G 2 .  ? 19.708 17.625 9.886  0.50 11.20 ? 38 EEE A O2    1
HETATM 298 C C3    B EEE G 2 .  ? 19.201 16.566 10.724 0.50 12.48 ? 38 EEE A C3    1
HETATM 299 C C4    B EEE G 2 .  ? 18.745 15.428 9.878  0.50 12.97 ? 38 EEE A C4    1
HETATM 300 C C1    B EEE H 2 .  ? 13.133 18.035 3.212  0.80 23.64 ? 40 EEE A C1    1
HETATM 301 C C2    B EEE H 2 .  ? 12.223 18.977 3.522  0.80 17.28 ? 40 EEE A C2    1
HETATM 302 O O1    B EEE H 2 .  ? 14.418 18.305 3.362  0.80 29.70 ? 40 EEE A O1    1
HETATM 303 O O2    B EEE H 2 .  ? 12.877 16.883 2.632  0.80 23.28 ? 40 EEE A O2    1
HETATM 304 C C3    B EEE H 2 .  ? 13.980 15.942 2.540  0.80 21.37 ? 40 EEE A C3    1
HETATM 305 C C4    B EEE H 2 .  ? 13.507 14.640 2.063  0.80 20.74 ? 40 EEE A C4    1
HETATM 306 C C     B MOH I 3 .  ? 15.051 9.545  -5.073 0.80 16.27 ? 42 MOH A C     1
HETATM 307 O O     B MOH I 3 .  ? 15.547 10.657 -5.742 0.80 11.22 ? 42 MOH A O     1

spin

Assembly

Assembly ID: 1qfi_1

Assembly defined by: Author

PDB ID: 1qfi

Experimental method: X-RAY DIFFRACTION

Resolution: 0.91 Å

UniProt ID: N/A

PubMed ID: N/A

Ligand 1 : EEE

Ligand 2 : EEE

Ligand 3 : EEE

Ligand 4 : EEE

Ligand 5 : MOH

Ligand 6 : EEE

Ligand 7 : III

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mmCIF Format

PDB Format

Ligand ID	NUC pairing detail	Ligand Name	Synonyms	Formula	2D structure
EEE	N/A	Ethyl acetate	1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;	"C4 H8 O2"
EEE	N/A	Ethyl acetate	1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;	"C4 H8 O2"
EEE	N/A	Ethyl acetate	1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;	"C4 H8 O2"
EEE	N/A	Ethyl acetate	1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;	"C4 H8 O2"
MOH	N/A	Methanol	1: Ch3oh; 2: Carbinol; 3: Wood naphtha; 4: Meoh; 5: Methylalkohol; 6: Wood alcohol; 7: Wood spirit; 8: Methyl alcohol; 9: Spirit of wood;	"C H4 O"
EEE	N/A	Ethyl acetate	1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;	"C4 H8 O2"
III	N/A	Peptide	N/A	"C14 H18 N4"	N/A

Reference

Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)

Function Annotation for BL3290810

Assembly

Assembly ID: 1qfi_1

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