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Yang Lab
Function Annotation for BL3279413
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data_1dpl_1 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 O "O5'" A DG A 1 1 ? -4.129 -4.616 16.670 0.50 13.23 ? 1 DG A "O5'" 1 HETATM 3 C "C5'" . DG A 1 1 ? -3.978 -5.685 17.586 1.00 10.33 ? 1 DG A "C5'" 1 HETATM 4 C "C4'" . DG A 1 1 ? -3.637 -6.940 16.870 1.00 7.67 ? 1 DG A "C4'" 1 HETATM 5 O "O4'" . DG A 1 1 ? -4.730 -7.294 15.970 1.00 7.90 ? 1 DG A "O4'" 1 HETATM 6 C "C3'" . DG A 1 1 ? -2.415 -6.913 15.950 1.00 7.02 ? 1 DG A "C3'" 1 HETATM 7 O "O3'" . DG A 1 1 ? -1.253 -7.199 16.735 1.00 7.48 ? 1 DG A "O3'" 1 HETATM 8 C "C2'" . DG A 1 1 ? -2.743 -7.953 14.919 1.00 6.34 ? 1 DG A "C2'" 1 HETATM 9 C "C1'" . DG A 1 1 ? -4.181 -7.833 14.764 1.00 7.13 ? 1 DG A "C1'" 1 HETATM 10 N N9 . DG A 1 1 ? -4.669 -6.929 13.664 1.00 7.10 ? 1 DG A N9 1 HETATM 11 C C8 . DG A 1 1 ? -5.410 -5.780 13.735 1.00 8.55 ? 1 DG A C8 1 HETATM 12 N N7 . DG A 1 1 ? -5.682 -5.281 12.554 1.00 8.50 ? 1 DG A N7 1 HETATM 13 C C5 . DG A 1 1 ? -5.105 -6.154 11.649 1.00 6.84 ? 1 DG A C5 1 HETATM 14 C C6 . DG A 1 1 ? -5.074 -6.171 10.236 1.00 7.07 ? 1 DG A C6 1 HETATM 15 O O6 . DG A 1 1 ? -5.560 -5.361 9.442 1.00 8.18 ? 1 DG A O6 1 HETATM 16 N N1 . DG A 1 1 ? -4.385 -7.274 9.738 1.00 6.07 ? 1 DG A N1 1 HETATM 17 C C2 . DG A 1 1 ? -3.792 -8.250 10.486 1.00 5.88 ? 1 DG A C2 1 HETATM 18 N N2 . DG A 1 1 ? -3.158 -9.232 9.863 1.00 6.30 ? 1 DG A N2 1 HETATM 19 N N3 . DG A 1 1 ? -3.814 -8.251 11.818 1.00 6.14 ? 1 DG A N3 1 HETATM 20 C C4 . DG A 1 1 ? -4.475 -7.184 12.328 1.00 6.40 ? 1 DG A C4 1 HETATM 21 P P . DC A 1 2 ? 0.159 -6.607 16.354 1.00 7.17 ? 2 DC A P 1 HETATM 22 O OP1 . DC A 1 2 ? 1.032 -7.098 17.438 1.00 9.49 ? 2 DC A OP1 1 HETATM 23 O OP2 . DC A 1 2 ? 0.079 -5.157 16.084 1.00 8.19 ? 2 DC A OP2 1 HETATM 24 O "O5'" . DC A 1 2 ? 0.540 -7.259 14.978 1.00 6.67 ? 2 DC A "O5'" 1 HETATM 25 C "C5'" . DC A 1 2 ? 0.845 -8.687 14.933 1.00 6.21 ? 2 DC A "C5'" 1 HETATM 26 C "C4'" . DC A 1 2 ? 1.061 -9.042 13.480 1.00 5.85 ? 2 DC A "C4'" 1 HETATM 27 O "O4'" . DC A 1 2 ? -0.171 -8.807 12.756 1.00 5.64 ? 2 DC A "O4'" 1 HETATM 28 C "C3'" . DC A 1 2 ? 2.080 -8.258 12.694 1.00 5.87 ? 2 DC A "C3'" 1 HETATM 29 O "O3'" . DC A 1 2 ? 3.384 -8.830 12.944 1.00 6.20 ? 2 DC A "O3'" 1 HETATM 30 C "C2'" . DC A 1 2 ? 1.621 -8.416 11.264 1.00 5.92 ? 2 DC A "C2'" 1 HETATM 31 C "C1'" . DC A 1 2 ? 0.149 -8.416 11.402 1.00 5.36 ? 2 DC A "C1'" 1 HETATM 32 N N1 . DC A 1 2 ? -0.536 -7.095 11.175 1.00 5.25 ? 2 DC A N1 1 HETATM 33 C C2 . DC A 1 2 ? -0.789 -6.771 9.851 1.00 5.43 ? 2 DC A C2 1 HETATM 34 O O2 . DC A 1 2 ? -0.402 -7.525 8.959 1.00 5.62 ? 2 DC A O2 1 HETATM 35 N N3 . DC A 1 2 ? -1.483 -5.633 9.585 1.00 5.07 ? 2 DC A N3 1 HETATM 36 C C4 . DC A 1 2 ? -1.832 -4.811 10.582 1.00 5.35 ? 2 DC A C4 1 HETATM 37 N N4 . DC A 1 2 ? -2.459 -3.681 10.271 1.00 6.32 ? 2 DC A N4 1 HETATM 38 C C5 . DC A 1 2 ? -1.489 -5.072 11.930 1.00 6.06 ? 2 DC A C5 1 HETATM 39 C C6 . DC A 1 2 ? -0.863 -6.228 12.175 1.00 5.82 ? 2 DC A C6 1 HETATM 40 P P . DG A 1 3 ? 4.694 -7.979 12.612 1.00 6.44 ? 3 DG A P 1 HETATM 41 O OP1 . DG A 1 3 ? 5.824 -8.863 12.983 1.00 8.30 ? 3 DG A OP1 1 HETATM 42 O OP2 . DG A 1 3 ? 4.632 -6.627 13.229 1.00 7.47 ? 3 DG A OP2 1 HETATM 43 O "O5'" . DG A 1 3 ? 4.565 -7.883 11.033 1.00 6.85 ? 3 DG A "O5'" 1 HETATM 44 C "C5'" . DG A 1 3 ? 5.087 -6.782 10.277 1.00 6.15 ? 3 DG A "C5'" 1 HETATM 45 C "C4'" . DG A 1 3 ? 4.628 -6.912 8.863 1.00 5.98 ? 3 DG A "C4'" 1 HETATM 46 O "O4'" . DG A 1 3 ? 3.198 -6.768 8.835 1.00 6.93 ? 3 DG A "O4'" 1 HETATM 47 C "C3'" . DG A 1 3 ? 5.140 -5.841 7.909 1.00 6.17 ? 3 DG A "C3'" 1 HETATM 48 O "O3'" . DG A 1 3 ? 6.438 -6.239 7.429 1.00 6.98 ? 3 DG A "O3'" 1 HETATM 49 C "C2'" . DG A 1 3 ? 4.093 -5.795 6.848 1.00 6.25 ? 3 DG A "C2'" 1 HETATM 50 C "C1'" . DG A 1 3 ? 2.922 -6.068 7.584 1.00 7.07 ? 3 DG A "C1'" 1 HETATM 51 N N9 . DG A 1 3 ? 2.090 -4.883 8.068 1.00 5.57 ? 3 DG A N9 1 HETATM 52 C C8 . DG A 1 3 ? 1.731 -4.500 9.337 1.00 6.21 ? 3 DG A C8 1 HETATM 53 N N7 . DG A 1 3 ? 0.978 -3.447 9.375 1.00 5.89 ? 3 DG A N7 1 HETATM 54 C C5 . DG A 1 3 ? 0.800 -3.101 8.043 1.00 5.50 ? 3 DG A C5 1 HETATM 55 C C6 . DG A 1 3 ? 0.052 -2.059 7.446 1.00 5.33 ? 3 DG A C6 1 HETATM 56 O O6 . DG A 1 3 ? -0.613 -1.177 8.002 1.00 6.41 ? 3 DG A O6 1 HETATM 57 N N1 . DG A 1 3 ? 0.162 -2.064 6.056 1.00 5.28 ? 3 DG A N1 1 HETATM 58 C C2 . DG A 1 3 ? 0.904 -2.968 5.338 1.00 5.04 ? 3 DG A C2 1 HETATM 59 N N2 . DG A 1 3 ? 0.882 -2.763 4.024 1.00 5.53 ? 3 DG A N2 1 HETATM 60 N N3 . DG A 1 3 ? 1.579 -3.967 5.878 1.00 5.25 ? 3 DG A N3 1 HETATM 61 C C4 . DG A 1 3 ? 1.481 -3.975 7.228 1.00 5.17 ? 3 DG A C4 1 HETATM 62 P P . DT A 1 4 ? 7.494 -5.119 7.002 1.00 6.95 ? 4 DT A P 1 HETATM 63 O OP1 . DT A 1 4 ? 8.729 -5.879 6.636 1.00 8.83 ? 4 DT A OP1 1 HETATM 64 O OP2 . DT A 1 4 ? 7.560 -4.065 8.008 1.00 8.54 ? 4 DT A OP2 1 HETATM 65 O "O5'" . DT A 1 4 ? 6.867 -4.454 5.706 1.00 6.35 ? 4 DT A "O5'" 1 HETATM 66 C "C5'" . DT A 1 4 ? 6.991 -5.019 4.402 1.00 6.40 ? 4 DT A "C5'" 1 HETATM 67 C "C4'" . DT A 1 4 ? 6.569 -3.963 3.385 1.00 6.14 ? 4 DT A "C4'" 1 HETATM 68 O "O4'" . DT A 1 4 ? 5.172 -3.691 3.509 1.00 5.85 ? 4 DT A "O4'" 1 HETATM 69 C "C3'" . DT A 1 4 ? 7.260 -2.609 3.531 1.00 5.96 ? 4 DT A "C3'" 1 HETATM 70 O "O3'" . DT A 1 4 ? 8.570 -2.657 2.955 1.00 7.00 ? 4 DT A "O3'" 1 HETATM 71 C "C2'" . DT A 1 4 ? 6.281 -1.694 2.834 1.00 5.83 ? 4 DT A "C2'" 1 HETATM 72 C "C1'" . DT A 1 4 ? 4.995 -2.269 3.199 1.00 5.50 ? 4 DT A "C1'" 1 HETATM 73 N N1 . DT A 1 4 ? 4.319 -1.695 4.408 1.00 4.88 ? 4 DT A N1 1 HETATM 74 C C2 . DT A 1 4 ? 3.479 -0.614 4.203 1.00 4.89 ? 4 DT A C2 1 HETATM 75 O O2 . DT A 1 4 ? 3.238 -0.157 3.100 1.00 5.46 ? 4 DT A O2 1 HETATM 76 N N3 . DT A 1 4 ? 2.870 -0.136 5.336 1.00 4.98 ? 4 DT A N3 1 HETATM 77 C C4 . DT A 1 4 ? 3.060 -0.549 6.631 1.00 5.07 ? 4 DT A C4 1 HETATM 78 O O4 . DT A 1 4 ? 2.451 -0.030 7.571 1.00 5.20 ? 4 DT A O4 1 HETATM 79 C C5 . DT A 1 4 ? 4.052 -1.592 6.790 1.00 5.28 ? 4 DT A C5 1 HETATM 80 C C7 . DT A 1 4 ? 4.391 -2.043 8.172 1.00 5.73 ? 4 DT A C7 1 HETATM 81 C C6 . DT A 1 4 ? 4.601 -2.115 5.688 1.00 4.94 ? 4 DT A C6 1 HETATM 82 P P . DA A 1 5 ? 9.713 -1.721 3.558 1.00 7.31 ? 5 DA A P 1 HETATM 83 O OP1 . DA A 1 5 ? 10.936 -2.057 2.755 1.00 10.22 ? 5 DA A OP1 1 HETATM 84 O OP2 . DA A 1 5 ? 9.792 -1.797 5.019 1.00 8.84 ? 5 DA A OP2 1 HETATM 85 O "O5'" . DA A 1 5 ? 9.202 -0.284 3.122 1.00 6.72 ? 5 DA A "O5'" 1 HETATM 86 C "C5'" . DA A 1 5 ? 9.353 0.848 3.965 1.00 7.16 ? 5 DA A "C5'" 1 HETATM 87 C "C4'" . DA A 1 5 ? 8.507 1.956 3.432 1.00 6.26 ? 5 DA A "C4'" 1 HETATM 88 O "O4'" . DA A 1 5 ? 7.101 1.592 3.512 1.00 6.16 ? 5 DA A "O4'" 1 HETATM 89 C "C3'" . DA A 1 5 ? 8.616 3.260 4.198 1.00 6.67 ? 5 DA A "C3'" 1 HETATM 90 O "O3'" . DA A 1 5 ? 9.773 3.987 3.773 1.00 8.06 ? 5 DA A "O3'" 1 HETATM 91 C "C2'" . DA A 1 5 ? 7.309 3.930 3.859 1.00 6.69 ? 5 DA A "C2'" 1 HETATM 92 C "C1'" . DA A 1 5 ? 6.348 2.752 3.827 1.00 5.98 ? 5 DA A "C1'" 1 HETATM 93 N N9 . DA A 1 5 ? 5.704 2.499 5.127 1.00 5.34 ? 5 DA A N9 1 HETATM 94 C C8 . DA A 1 5 ? 5.954 1.516 6.040 1.00 5.75 ? 5 DA A C8 1 HETATM 95 N N7 . DA A 1 5 ? 5.193 1.582 7.116 1.00 5.44 ? 5 DA A N7 1 HETATM 96 C C5 . DA A 1 5 ? 4.395 2.695 6.888 1.00 5.38 ? 5 DA A C5 1 HETATM 97 C C6 . DA A 1 5 ? 3.346 3.282 7.618 1.00 5.28 ? 5 DA A C6 1 HETATM 98 N N6 . DA A 1 5 ? 2.951 2.826 8.808 1.00 5.35 ? 5 DA A N6 1 HETATM 99 N N1 . DA A 1 5 ? 2.743 4.365 7.111 1.00 5.45 ? 5 DA A N1 1 HETATM 100 C C2 . DA A 1 5 ? 3.146 4.832 5.915 1.00 5.47 ? 5 DA A C2 1 HETATM 101 N N3 . DA A 1 5 ? 4.105 4.372 5.121 1.00 5.80 ? 5 DA A N3 1 HETATM 102 C C4 . DA A 1 5 ? 4.691 3.277 5.672 1.00 5.05 ? 5 DA A C4 1 HETATM 103 P P . T23 A 1 6 ? 10.575 4.871 4.832 1.00 8.84 ? 6 T23 A P 1 HETATM 104 O OP1 . T23 A 1 6 ? 11.737 5.382 4.058 1.00 12.35 ? 6 T23 A OP1 1 HETATM 105 O OP2 . T23 A 1 6 ? 10.796 4.144 6.115 1.00 9.98 ? 6 T23 A OP2 1 HETATM 106 O "O5'" . T23 A 1 6 ? 9.543 6.040 5.222 1.00 7.95 ? 6 T23 A "O5'" 1 HETATM 107 N N1 . T23 A 1 6 ? 6.197 6.621 7.309 1.00 6.06 ? 6 T23 A N1 1 HETATM 108 C C6 . T23 A 1 6 ? 7.104 5.597 7.366 1.00 6.44 ? 6 T23 A C6 1 HETATM 109 C C2 . T23 A 1 6 ? 5.171 6.725 8.237 1.00 5.49 ? 6 T23 A C2 1 HETATM 110 O O2 . T23 A 1 6 ? 4.380 7.668 8.242 1.00 6.57 ? 6 T23 A O2 1 HETATM 111 N N3 . T23 A 1 6 ? 5.099 5.703 9.144 1.00 5.59 ? 6 T23 A N3 1 HETATM 112 C C4 . T23 A 1 6 ? 5.981 4.656 9.276 1.00 5.60 ? 6 T23 A C4 1 HETATM 113 O O4 . T23 A 1 6 ? 5.794 3.836 10.168 1.00 6.24 ? 6 T23 A O4 1 HETATM 114 C C5 . T23 A 1 6 ? 7.041 4.624 8.293 1.00 5.76 ? 6 T23 A C5 1 HETATM 115 C C5M . T23 A 1 6 ? 8.043 3.505 8.360 1.00 6.73 ? 6 T23 A C5M 1 HETATM 116 C "C2'" . T23 A 1 6 ? 7.088 8.897 6.704 1.00 6.64 ? 6 T23 A "C2'" 1 HETATM 117 O "O2'" . T23 A 1 6 ? 6.673 10.030 6.049 1.00 8.22 ? 6 T23 A "O2'" 1 HETATM 118 C C2M . T23 A 1 6 ? 5.479 10.688 6.472 1.00 8.52 ? 6 T23 A C2M 1 HETATM 119 C "C5'" . T23 A 1 6 ? 9.125 6.970 4.228 1.00 8.81 ? 6 T23 A "C5'" 1 HETATM 120 C "C4'" . T23 A 1 6 ? 8.125 7.920 4.873 1.00 7.82 ? 6 T23 A "C4'" 1 HETATM 121 O "O4'" . T23 A 1 6 ? 6.887 7.167 5.124 1.00 6.90 ? 6 T23 A "O4'" 1 HETATM 122 C "C1'" . T23 A 1 6 ? 6.272 7.723 6.273 1.00 6.51 ? 6 T23 A "C1'" 1 HETATM 123 C "C3'" . T23 A 1 6 ? 8.491 8.516 6.214 1.00 6.72 ? 6 T23 A "C3'" 1 HETATM 124 C C3M . T23 A 1 6 ? 9.551 9.640 6.215 1.00 7.64 ? 6 T23 A C3M 1 HETATM 125 P P . DA A 1 7 ? 10.361 9.907 7.735 1.00 7.99 ? 7 DA A P 1 HETATM 126 O OP1 . DA A 1 7 ? 11.390 11.000 7.496 1.00 10.78 ? 7 DA A OP1 1 HETATM 127 O OP2 . DA A 1 7 ? 10.815 8.642 8.293 1.00 9.63 ? 7 DA A OP2 1 HETATM 128 O "O5'" A DA A 1 7 ? 9.260 10.485 8.777 0.50 6.82 ? 7 DA A "O5'" 1 HETATM 130 C "C5'" A DA A 1 7 ? 8.750 11.813 8.635 0.50 7.00 ? 7 DA A "C5'" 1 HETATM 132 C "C4'" A DA A 1 7 ? 7.804 12.093 9.780 0.50 6.45 ? 7 DA A "C4'" 1 HETATM 134 O "O4'" A DA A 1 7 ? 6.598 11.282 9.642 0.50 4.73 ? 7 DA A "O4'" 1 HETATM 136 C "C3'" A DA A 1 7 ? 8.274 11.755 11.194 0.50 5.90 ? 7 DA A "C3'" 1 HETATM 138 O "O3'" A DA A 1 7 ? 9.154 12.775 11.689 0.50 6.00 ? 7 DA A "O3'" 1 HETATM 140 C "C2'" A DA A 1 7 ? 6.975 11.670 11.899 0.50 4.64 ? 7 DA A "C2'" 1 HETATM 142 C "C1'" A DA A 1 7 ? 6.132 10.895 10.898 0.50 5.64 ? 7 DA A "C1'" 1 HETATM 144 N N9 . DA A 1 7 ? 6.334 9.455 11.116 1.00 5.65 ? 7 DA A N9 1 HETATM 145 C C8 . DA A 1 7 ? 7.224 8.572 10.573 1.00 6.17 ? 7 DA A C8 1 HETATM 146 N N7 . DA A 1 7 ? 7.120 7.360 11.049 1.00 6.56 ? 7 DA A N7 1 HETATM 147 C C5 . DA A 1 7 ? 6.093 7.459 11.988 1.00 5.71 ? 7 DA A C5 1 HETATM 148 C C6 . DA A 1 7 ? 5.502 6.522 12.853 1.00 6.10 ? 7 DA A C6 1 HETATM 149 N N6 . DA A 1 7 ? 5.857 5.242 12.917 1.00 7.10 ? 7 DA A N6 1 HETATM 150 N N1 . DA A 1 7 ? 4.527 6.967 13.680 1.00 6.05 ? 7 DA A N1 1 HETATM 151 C C2 . DA A 1 7 ? 4.148 8.245 13.617 1.00 6.15 ? 7 DA A C2 1 HETATM 152 N N3 . DA A 1 7 ? 4.623 9.210 12.837 1.00 6.29 ? 7 DA A N3 1 HETATM 153 C C4 . DA A 1 7 ? 5.590 8.748 12.022 1.00 5.70 ? 7 DA A C4 1 HETATM 154 P P A DC A 1 8 ? 10.149 12.560 12.869 0.50 7.33 ? 8 DC A P 1 HETATM 156 O OP1 A DC A 1 8 ? 10.964 13.795 12.977 0.50 11.24 ? 8 DC A OP1 1 HETATM 158 O OP2 A DC A 1 8 ? 10.865 11.262 12.719 0.50 11.23 ? 8 DC A OP2 1 HETATM 160 O "O5'" A DC A 1 8 ? 9.256 12.419 14.149 0.50 5.64 ? 8 DC A "O5'" 1 HETATM 162 C "C5'" A DC A 1 8 ? 8.458 13.523 14.600 0.50 7.95 ? 8 DC A "C5'" 1 HETATM 164 C "C4'" A DC A 1 8 ? 7.513 13.014 15.672 0.50 5.78 ? 8 DC A "C4'" 1 HETATM 166 O "O4'" A DC A 1 8 ? 6.736 11.895 15.132 0.50 5.71 ? 8 DC A "O4'" 1 HETATM 168 C "C3'" A DC A 1 8 ? 8.072 12.394 16.940 0.50 5.19 ? 8 DC A "C3'" 1 HETATM 170 O "O3'" A DC A 1 8 ? 8.587 13.377 17.832 0.50 5.00 ? 8 DC A "O3'" 1 HETATM 172 C "C2'" A DC A 1 8 ? 6.847 11.654 17.449 0.50 5.70 ? 8 DC A "C2'" 1 HETATM 174 C "C1'" A DC A 1 8 ? 6.269 11.067 16.181 0.50 6.41 ? 8 DC A "C1'" 1 HETATM 176 N N1 . DC A 1 8 ? 6.735 9.699 15.920 1.00 5.92 ? 8 DC A N1 1 HETATM 177 C C2 . DC A 1 8 ? 6.159 8.694 16.692 1.00 6.04 ? 8 DC A C2 1 HETATM 178 O O2 . DC A 1 8 ? 5.281 9.024 17.522 1.00 6.66 ? 8 DC A O2 1 HETATM 179 N N3 . DC A 1 8 ? 6.569 7.420 16.535 1.00 6.40 ? 8 DC A N3 1 HETATM 180 C C4 . DC A 1 8 ? 7.504 7.119 15.618 1.00 6.85 ? 8 DC A C4 1 HETATM 181 N N4 . DC A 1 8 ? 7.874 5.856 15.500 1.00 8.97 ? 8 DC A N4 1 HETATM 182 C C5 . DC A 1 8 ? 8.129 8.134 14.832 1.00 7.62 ? 8 DC A C5 1 HETATM 183 C C6 . DC A 1 8 ? 7.715 9.401 15.007 1.00 6.89 ? 8 DC A C6 1 HETATM 184 P P . DG A 1 9 ? 9.587 13.026 19.037 1.00 6.28 ? 9 DG A P 1 HETATM 185 O OP1 . DG A 1 9 ? 9.944 14.347 19.602 1.00 8.07 ? 9 DG A OP1 1 HETATM 186 O OP2 . DG A 1 9 ? 10.654 12.085 18.639 1.00 8.27 ? 9 DG A OP2 1 HETATM 187 O "O5'" . DG A 1 9 ? 8.717 12.191 20.048 1.00 5.88 ? 9 DG A "O5'" 1 HETATM 188 C "C5'" . DG A 1 9 ? 7.723 12.833 20.854 1.00 5.45 ? 9 DG A "C5'" 1 HETATM 189 C "C4'" . DG A 1 9 ? 7.145 11.818 21.807 1.00 5.40 ? 9 DG A "C4'" 1 HETATM 190 O "O4'" . DG A 1 9 ? 6.435 10.777 21.087 1.00 5.77 ? 9 DG A "O4'" 1 HETATM 191 C "C3'" . DG A 1 9 ? 8.142 11.036 22.648 1.00 5.10 ? 9 DG A "C3'" 1 HETATM 192 O "O3'" . DG A 1 9 ? 8.612 11.838 23.723 1.00 5.90 ? 9 DG A "O3'" 1 HETATM 193 C "C2'" . DG A 1 9 ? 7.300 9.857 23.068 1.00 5.97 ? 9 DG A "C2'" 1 HETATM 194 C "C1'" . DG A 1 9 ? 6.619 9.536 21.805 1.00 5.97 ? 9 DG A "C1'" 1 HETATM 195 N N9 . DG A 1 9 ? 7.390 8.643 20.931 1.00 5.97 ? 9 DG A N9 1 HETATM 196 C C8 . DG A 1 9 ? 8.074 8.881 19.775 1.00 6.62 ? 9 DG A C8 1 HETATM 197 N N7 . DG A 1 9 ? 8.647 7.820 19.249 1.00 6.57 ? 9 DG A N7 1 HETATM 198 C C5 . DG A 1 9 ? 8.308 6.806 20.141 1.00 6.22 ? 9 DG A C5 1 HETATM 199 C C6 . DG A 1 9 ? 8.620 5.431 20.136 1.00 6.03 ? 9 DG A C6 1 HETATM 200 O O6 . DG A 1 9 ? 9.297 4.803 19.296 1.00 7.21 ? 9 DG A O6 1 HETATM 201 N N1 . DG A 1 9 ? 8.101 4.773 21.247 1.00 6.10 ? 9 DG A N1 1 HETATM 202 C C2 . DG A 1 9 ? 7.365 5.351 22.260 1.00 6.24 ? 9 DG A C2 1 HETATM 203 N N2 . DG A 1 9 ? 6.948 4.569 23.241 1.00 7.88 ? 9 DG A N2 1 HETATM 204 N N3 . DG A 1 9 ? 7.051 6.652 22.257 1.00 6.53 ? 9 DG A N3 1 HETATM 205 C C4 . DG A 1 9 ? 7.539 7.295 21.184 1.00 5.69 ? 9 DG A C4 1 HETATM 206 P P . DC A 1 10 ? 10.081 11.538 24.300 1.00 5.91 ? 10 DC A P 1 HETATM 207 O OP1 . DC A 1 10 ? 10.273 12.645 25.291 1.00 7.27 ? 10 DC A OP1 1 HETATM 208 O OP2 . DC A 1 10 ? 11.063 11.363 23.228 1.00 6.84 ? 10 DC A OP2 1 HETATM 209 O "O5'" . DC A 1 10 ? 9.953 10.128 25.026 1.00 5.75 ? 10 DC A "O5'" 1 HETATM 210 C "C5'" . DC A 1 10 ? 9.077 9.959 26.149 1.00 5.87 ? 10 DC A "C5'" 1 HETATM 211 C "C4'" . DC A 1 10 ? 9.188 8.549 26.672 1.00 5.56 ? 10 DC A "C4'" 1 HETATM 212 O "O4'" . DC A 1 10 ? 8.708 7.612 25.667 1.00 5.70 ? 10 DC A "O4'" 1 HETATM 213 C "C3'" . DC A 1 10 ? 10.580 8.059 27.007 1.00 5.27 ? 10 DC A "C3'" 1 HETATM 214 O "O3'" . DC A 1 10 ? 11.010 8.447 28.315 1.00 5.83 ? 10 DC A "O3'" 1 HETATM 215 C "C2'" . DC A 1 10 ? 10.422 6.549 26.893 1.00 5.34 ? 10 DC A "C2'" 1 HETATM 216 C "C1'" . DC A 1 10 ? 9.436 6.405 25.754 1.00 5.23 ? 10 DC A "C1'" 1 HETATM 217 N N1 . DC A 1 10 ? 10.113 6.168 24.448 1.00 5.30 ? 10 DC A N1 1 HETATM 218 C C2 . DC A 1 10 ? 10.514 4.871 24.152 1.00 5.28 ? 10 DC A C2 1 HETATM 219 O O2 . DC A 1 10 ? 10.283 3.972 25.000 1.00 5.75 ? 10 DC A O2 1 HETATM 220 N N3 . DC A 1 10 ? 11.131 4.627 22.965 1.00 5.65 ? 10 DC A N3 1 HETATM 221 C C4 . DC A 1 10 ? 11.395 5.628 22.138 1.00 5.80 ? 10 DC A C4 1 HETATM 222 N N4 . DC A 1 10 ? 12.034 5.327 21.005 1.00 6.75 ? 10 DC A N4 1 HETATM 223 C C5 . DC A 1 10 ? 11.029 6.970 22.449 1.00 5.99 ? 10 DC A C5 1 HETATM 224 C C6 . DC A 1 10 ? 10.394 7.203 23.612 1.00 5.56 ? 10 DC A C6 1 HETATM 225 O "O5'" . DG B 1 1 ? 12.424 -4.393 18.427 1.00 22.70 ? 11 DG B "O5'" 1 HETATM 226 C "C5'" . DG B 1 1 ? 12.380 -5.516 19.282 1.00 14.75 ? 11 DG B "C5'" 1 HETATM 227 C "C4'" . DG B 1 1 ? 11.969 -5.112 20.676 1.00 10.42 ? 11 DG B "C4'" 1 HETATM 228 O "O4'" . DG B 1 1 ? 12.972 -4.192 21.210 1.00 10.51 ? 11 DG B "O4'" 1 HETATM 229 C "C3'" . DG B 1 1 ? 10.649 -4.394 20.782 1.00 8.57 ? 11 DG B "C3'" 1 HETATM 230 O "O3'" . DG B 1 1 ? 9.618 -5.363 20.846 1.00 8.69 ? 11 DG B "O3'" 1 HETATM 231 C "C2'" . DG B 1 1 ? 10.822 -3.597 22.051 1.00 8.63 ? 11 DG B "C2'" 1 HETATM 232 C "C1'" . DG B 1 1 ? 12.236 -3.233 21.980 1.00 9.81 ? 11 DG B "C1'" 1 HETATM 233 N N9 . DG B 1 1 ? 12.509 -1.902 21.305 1.00 8.66 ? 11 DG B N9 1 HETATM 234 C C8 . DG B 1 1 ? 13.175 -1.667 20.135 1.00 9.57 ? 11 DG B C8 1 HETATM 235 N N7 . DG B 1 1 ? 13.255 -0.407 19.824 1.00 9.04 ? 11 DG B N7 1 HETATM 236 C C5 . DG B 1 1 ? 12.613 0.235 20.869 1.00 7.63 ? 11 DG B C5 1 HETATM 237 C C6 . DG B 1 1 ? 12.388 1.612 21.119 1.00 7.05 ? 11 DG B C6 1 HETATM 238 O O6 . DG B 1 1 ? 12.723 2.590 20.419 1.00 7.81 ? 11 DG B O6 1 HETATM 239 N N1 . DG B 1 1 ? 11.715 1.819 22.317 1.00 6.27 ? 11 DG B N1 1 HETATM 240 C C2 . DG B 1 1 ? 11.264 0.828 23.159 1.00 6.05 ? 11 DG B C2 1 HETATM 241 N N2 . DG B 1 1 ? 10.611 1.219 24.248 1.00 5.85 ? 11 DG B N2 1 HETATM 242 N N3 . DG B 1 1 ? 11.483 -0.457 22.942 1.00 6.55 ? 11 DG B N3 1 HETATM 243 C C4 . DG B 1 1 ? 12.150 -0.687 21.797 1.00 6.84 ? 11 DG B C4 1 HETATM 244 P P . DC B 1 2 ? 8.134 -5.009 20.350 1.00 8.13 ? 12 DC B P 1 HETATM 245 O OP1 . DC B 1 2 ? 7.367 -6.252 20.459 1.00 10.02 ? 12 DC B OP1 1 HETATM 246 O OP2 . DC B 1 2 ? 8.172 -4.307 19.052 1.00 9.79 ? 12 DC B OP2 1 HETATM 247 O "O5'" . DC B 1 2 ? 7.564 -3.912 21.389 1.00 8.18 ? 12 DC B "O5'" 1 HETATM 248 C "C5'" . DC B 1 2 ? 7.275 -4.296 22.719 1.00 8.00 ? 12 DC B "C5'" 1 HETATM 249 C "C4'" . DC B 1 2 ? 6.856 -3.057 23.487 1.00 8.01 ? 12 DC B "C4'" 1 HETATM 250 O "O4'" . DC B 1 2 ? 8.006 -2.146 23.615 1.00 7.35 ? 12 DC B "O4'" 1 HETATM 251 C "C3'" . DC B 1 2 ? 5.763 -2.208 22.890 1.00 7.04 ? 12 DC B "C3'" 1 HETATM 252 O "O3'" . DC B 1 2 ? 4.456 -2.800 23.100 1.00 9.82 ? 12 DC B "O3'" 1 HETATM 253 C "C2'" . DC B 1 2 ? 6.019 -0.916 23.630 1.00 6.50 ? 12 DC B "C2'" 1 HETATM 254 C "C1'" . DC B 1 2 ? 7.467 -0.808 23.608 1.00 7.35 ? 12 DC B "C1'" 1 HETATM 255 N N1 . DC B 1 2 ? 8.040 -0.143 22.396 1.00 6.64 ? 12 DC B N1 1 HETATM 256 C C2 . DC B 1 2 ? 8.017 1.257 22.382 1.00 5.68 ? 12 DC B C2 1 HETATM 257 O O2 . DC B 1 2 ? 7.524 1.832 23.357 1.00 6.32 ? 12 DC B O2 1 HETATM 258 N N3 . DC B 1 2 ? 8.543 1.930 21.312 1.00 6.18 ? 12 DC B N3 1 HETATM 259 C C4 . DC B 1 2 ? 9.009 1.236 20.266 1.00 6.48 ? 12 DC B C4 1 HETATM 260 N N4 . DC B 1 2 ? 9.518 1.926 19.243 1.00 7.43 ? 12 DC B N4 1 HETATM 261 C C5 . DC B 1 2 ? 9.012 -0.198 20.248 1.00 6.83 ? 12 DC B C5 1 HETATM 262 C C6 . DC B 1 2 ? 8.502 -0.825 21.311 1.00 6.80 ? 12 DC B C6 1 HETATM 263 P P . DG B 1 3 ? 3.317 -2.567 21.984 1.00 10.53 ? 13 DG B P 1 HETATM 264 O OP1 . DG B 1 3 ? 2.138 -3.315 22.464 1.00 12.90 ? 13 DG B OP1 1 HETATM 265 O OP2 . DG B 1 3 ? 3.797 -2.910 20.692 1.00 15.34 ? 13 DG B OP2 1 HETATM 266 O "O5'" . DG B 1 3 ? 3.058 -1.005 22.003 1.00 8.16 ? 13 DG B "O5'" 1 HETATM 267 C "C5'" . DG B 1 3 ? 2.486 -0.453 23.175 1.00 7.96 ? 13 DG B "C5'" 1 HETATM 268 C "C4'" . DG B 1 3 ? 2.422 1.049 23.015 1.00 7.52 ? 13 DG B "C4'" 1 HETATM 269 O "O4'" . DG B 1 3 ? 3.776 1.585 22.972 1.00 8.03 ? 13 DG B "O4'" 1 HETATM 270 C "C3'" . DG B 1 3 ? 1.786 1.610 21.766 1.00 6.71 ? 13 DG B "C3'" 1 HETATM 271 O "O3'" . DG B 1 3 ? 0.374 1.467 21.862 1.00 6.44 ? 13 DG B "O3'" 1 HETATM 272 C "C2'" . DG B 1 3 ? 2.313 3.016 21.879 1.00 7.13 ? 13 DG B "C2'" 1 HETATM 273 C "C1'" . DG B 1 3 ? 3.801 2.784 22.295 1.00 7.50 ? 13 DG B "C1'" 1 HETATM 274 N N9 . DG B 1 3 ? 4.601 2.712 21.088 1.00 7.08 ? 13 DG B N9 1 HETATM 275 C C8 . DG B 1 3 ? 5.173 1.609 20.512 1.00 6.87 ? 13 DG B C8 1 HETATM 276 N N7 . DG B 1 3 ? 5.814 1.892 19.415 1.00 7.15 ? 13 DG B N7 1 HETATM 277 C C5 . DG B 1 3 ? 5.655 3.258 19.245 1.00 6.53 ? 13 DG B C5 1 HETATM 278 C C6 . DG B 1 3 ? 6.091 4.135 18.221 1.00 6.23 ? 13 DG B C6 1 HETATM 279 O O6 . DG B 1 3 ? 6.762 3.865 17.217 1.00 7.02 ? 13 DG B O6 1 HETATM 280 N N1 . DG B 1 3 ? 5.657 5.437 18.454 1.00 6.37 ? 13 DG B N1 1 HETATM 281 C C2 . DG B 1 3 ? 4.896 5.858 19.514 1.00 6.35 ? 13 DG B C2 1 HETATM 282 N N2 . DG B 1 3 ? 4.599 7.146 19.531 1.00 6.42 ? 13 DG B N2 1 HETATM 283 N N3 . DG B 1 3 ? 4.501 5.043 20.466 1.00 6.38 ? 13 DG B N3 1 HETATM 284 C C4 . DG B 1 3 ? 4.904 3.776 20.267 1.00 6.57 ? 13 DG B C4 1 HETATM 285 P P . DT B 1 4 ? -0.502 1.442 20.533 1.00 6.12 ? 14 DT B P 1 HETATM 286 O OP1 . DT B 1 4 ? -1.889 1.279 21.023 1.00 7.43 ? 14 DT B OP1 1 HETATM 287 O OP2 . DT B 1 4 ? 0.064 0.495 19.535 1.00 7.35 ? 14 DT B OP2 1 HETATM 288 O "O5'" . DT B 1 4 ? -0.296 2.900 19.897 1.00 5.91 ? 14 DT B "O5'" 1 HETATM 289 C "C5'" . DT B 1 4 ? -0.864 4.029 20.559 1.00 6.72 ? 14 DT B "C5'" 1 HETATM 290 C "C4'" . DT B 1 4 ? -0.613 5.258 19.743 1.00 5.90 ? 14 DT B "C4'" 1 HETATM 291 O "O4'" . DT B 1 4 ? 0.836 5.541 19.679 1.00 5.83 ? 14 DT B "O4'" 1 HETATM 292 C "C3'" . DT B 1 4 ? -1.009 5.225 18.272 1.00 5.92 ? 14 DT B "C3'" 1 HETATM 293 O "O3'" . DT B 1 4 ? -2.417 5.269 18.155 1.00 6.57 ? 14 DT B "O3'" 1 HETATM 294 C "C2'" . DT B 1 4 ? -0.248 6.446 17.791 1.00 5.66 ? 14 DT B "C2'" 1 HETATM 295 C "C1'" . DT B 1 4 ? 1.089 6.266 18.502 1.00 5.37 ? 14 DT B "C1'" 1 HETATM 296 N N1 . DT B 1 4 ? 2.007 5.496 17.631 1.00 5.56 ? 14 DT B N1 1 HETATM 297 C C2 . DT B 1 4 ? 2.567 6.214 16.592 1.00 5.65 ? 14 DT B C2 1 HETATM 298 O O2 . DT B 1 4 ? 2.348 7.401 16.401 1.00 6.01 ? 14 DT B O2 1 HETATM 299 N N3 . DT B 1 4 ? 3.389 5.484 15.771 1.00 5.43 ? 14 DT B N3 1 HETATM 300 C C4 . DT B 1 4 ? 3.637 4.136 15.836 1.00 5.80 ? 14 DT B C4 1 HETATM 301 O O4 . DT B 1 4 ? 4.363 3.617 14.997 1.00 6.83 ? 14 DT B O4 1 HETATM 302 C C5 . DT B 1 4 ? 3.027 3.447 16.945 1.00 5.92 ? 14 DT B C5 1 HETATM 303 C C7 . DT B 1 4 ? 3.264 1.982 17.116 1.00 7.13 ? 14 DT B C7 1 HETATM 304 C C6 . DT B 1 4 ? 2.257 4.156 17.789 1.00 5.79 ? 14 DT B C6 1 HETATM 305 P P . DA B 1 5 ? -3.107 4.614 16.844 1.00 6.33 ? 15 DA B P 1 HETATM 306 O OP1 . DA B 1 5 ? -4.536 4.501 17.215 1.00 7.81 ? 15 DA B OP1 1 HETATM 307 O OP2 . DA B 1 5 ? -2.355 3.433 16.355 1.00 7.39 ? 15 DA B OP2 1 HETATM 308 O "O5'" . DA B 1 5 ? -2.903 5.712 15.734 1.00 6.64 ? 15 DA B "O5'" 1 HETATM 309 C "C5'" . DA B 1 5 ? -3.456 7.019 15.917 1.00 7.02 ? 15 DA B "C5'" 1 HETATM 310 C "C4'" . DA B 1 5 ? -2.863 7.975 14.857 1.00 6.49 ? 15 DA B "C4'" 1 HETATM 311 O "O4'" . DA B 1 5 ? -1.417 8.002 15.006 1.00 6.33 ? 15 DA B "O4'" 1 HETATM 312 C "C3'" . DA B 1 5 ? -3.120 7.639 13.418 1.00 6.56 ? 15 DA B "C3'" 1 HETATM 313 O "O3'" . DA B 1 5 ? -4.406 8.139 13.055 1.00 7.27 ? 15 DA B "O3'" 1 HETATM 314 C "C2'" . DA B 1 5 ? -1.969 8.325 12.734 1.00 6.18 ? 15 DA B "C2'" 1 HETATM 315 C "C1'" . DA B 1 5 ? -0.855 8.099 13.667 1.00 5.84 ? 15 DA B "C1'" 1 HETATM 316 N N9 . DA B 1 5 ? -0.080 6.863 13.448 1.00 5.58 ? 15 DA B N9 1 HETATM 317 C C8 . DA B 1 5 ? -0.139 5.693 14.139 1.00 5.46 ? 15 DA B C8 1 HETATM 318 N N7 . DA B 1 5 ? 0.721 4.783 13.706 1.00 5.24 ? 15 DA B N7 1 HETATM 319 C C5 . DA B 1 5 ? 1.390 5.435 12.679 1.00 5.11 ? 15 DA B C5 1 HETATM 320 C C6 . DA B 1 5 ? 2.451 5.017 11.838 1.00 5.10 ? 15 DA B C6 1 HETATM 321 N N6 . DA B 1 5 ? 3.032 3.818 11.887 1.00 5.80 ? 15 DA B N6 1 HETATM 322 N N1 . DA B 1 5 ? 2.867 5.905 10.917 1.00 5.50 ? 15 DA B N1 1 HETATM 323 C C2 . DA B 1 5 ? 2.312 7.119 10.854 1.00 5.61 ? 15 DA B C2 1 HETATM 324 N N3 . DA B 1 5 ? 1.319 7.610 11.607 1.00 5.67 ? 15 DA B N3 1 HETATM 325 C C4 . DA B 1 5 ? 0.916 6.720 12.504 1.00 5.30 ? 15 DA B C4 1 HETATM 326 P P . T23 B 1 6 ? -5.239 7.575 11.829 1.00 6.82 ? 16 T23 B P 1 HETATM 327 O OP1 . T23 B 1 6 ? -6.561 8.253 11.899 1.00 8.93 ? 16 T23 B OP1 1 HETATM 328 O OP2 . T23 B 1 6 ? -5.188 6.104 11.738 1.00 7.88 ? 16 T23 B OP2 1 HETATM 329 O "O5'" . T23 B 1 6 ? -4.414 8.042 10.543 1.00 6.29 ? 16 T23 B "O5'" 1 HETATM 330 N N1 . T23 B 1 6 ? -1.094 7.308 8.515 1.00 5.43 ? 16 T23 B N1 1 HETATM 331 C C6 . T23 B 1 6 ? -1.746 6.603 9.502 1.00 5.43 ? 16 T23 B C6 1 HETATM 332 C C2 . T23 B 1 6 ? 0.025 6.800 7.908 1.00 5.18 ? 16 T23 B C2 1 HETATM 333 O O2 . T23 B 1 6 ? 0.615 7.392 7.012 1.00 6.22 ? 16 T23 B O2 1 HETATM 334 N N3 . T23 B 1 6 ? 0.453 5.582 8.369 1.00 5.21 ? 16 T23 B N3 1 HETATM 335 C C4 . T23 B 1 6 ? -0.137 4.834 9.364 1.00 5.10 ? 16 T23 B C4 1 HETATM 336 O O4 . T23 B 1 6 ? 0.345 3.743 9.683 1.00 5.49 ? 16 T23 B O4 1 HETATM 337 C C5 . T23 B 1 6 ? -1.325 5.404 9.950 1.00 5.29 ? 16 T23 B C5 1 HETATM 338 C C5M . T23 B 1 6 ? -2.020 4.659 11.038 1.00 5.86 ? 16 T23 B C5M 1 HETATM 339 C "C2'" . T23 B 1 6 ? -2.569 8.687 6.982 1.00 5.83 ? 16 T23 B "C2'" 1 HETATM 340 O "O2'" . T23 B 1 6 ? -2.540 9.936 6.288 1.00 8.11 ? 16 T23 B "O2'" 1 HETATM 341 C C2M . T23 B 1 6 ? -1.426 10.131 5.418 1.00 8.76 ? 16 T23 B C2M 1 HETATM 342 C "C5'" . T23 B 1 6 ? -4.405 9.430 10.143 1.00 6.78 ? 16 T23 B "C5'" 1 HETATM 343 C "C4'" . T23 B 1 6 ? -3.580 9.558 8.909 1.00 6.37 ? 16 T23 B "C4'" 1 HETATM 344 O "O4'" . T23 B 1 6 ? -2.184 9.274 9.231 1.00 5.97 ? 16 T23 B "O4'" 1 HETATM 345 C "C1'" . T23 B 1 6 ? -1.568 8.665 8.080 1.00 5.95 ? 16 T23 B "C1'" 1 HETATM 346 C "C3'" . T23 B 1 6 ? -3.886 8.602 7.762 1.00 6.23 ? 16 T23 B "C3'" 1 HETATM 347 C C3M . T23 B 1 6 ? -5.164 8.883 6.991 1.00 7.63 ? 16 T23 B C3M 1 HETATM 348 P P . DA B 1 7 ? -5.863 7.587 6.066 1.00 7.46 ? 17 DA B P 1 HETATM 349 O OP1 . DA B 1 7 ? -7.082 8.055 5.372 1.00 9.84 ? 17 DA B OP1 1 HETATM 350 O OP2 . DA B 1 7 ? -6.010 6.428 6.951 1.00 9.05 ? 17 DA B OP2 1 HETATM 351 O "O5'" . DA B 1 7 ? -4.763 7.131 4.982 1.00 6.87 ? 17 DA B "O5'" 1 HETATM 352 C "C5'" . DA B 1 7 ? -4.584 7.937 3.825 1.00 7.49 ? 17 DA B "C5'" 1 HETATM 353 C "C4'" . DA B 1 7 ? -3.539 7.243 2.937 1.00 6.83 ? 17 DA B "C4'" 1 HETATM 354 O "O4'" . DA B 1 7 ? -2.295 7.168 3.631 1.00 7.04 ? 17 DA B "O4'" 1 HETATM 355 C "C3'" . DA B 1 7 ? -3.829 5.816 2.525 1.00 7.02 ? 17 DA B "C3'" 1 HETATM 356 O "O3'" . DA B 1 7 ? -4.804 5.781 1.477 1.00 8.14 ? 17 DA B "O3'" 1 HETATM 357 C "C2'" . DA B 1 7 ? -2.450 5.387 2.108 1.00 7.22 ? 17 DA B "C2'" 1 HETATM 358 C "C1'" . DA B 1 7 ? -1.587 6.010 3.166 1.00 6.66 ? 17 DA B "C1'" 1 HETATM 359 N N9 . DA B 1 7 ? -1.369 5.144 4.326 1.00 5.85 ? 17 DA B N9 1 HETATM 360 C C8 . DA B 1 7 ? -2.072 5.079 5.492 1.00 6.17 ? 17 DA B C8 1 HETATM 361 N N7 . DA B 1 7 ? -1.643 4.156 6.319 1.00 6.03 ? 17 DA B N7 1 HETATM 362 C C5 . DA B 1 7 ? -0.591 3.552 5.643 1.00 5.68 ? 17 DA B C5 1 HETATM 363 C C6 . DA B 1 7 ? 0.268 2.480 5.946 1.00 5.42 ? 17 DA B C6 1 HETATM 364 N N6 . DA B 1 7 ? 0.257 1.834 7.114 1.00 5.69 ? 17 DA B N6 1 HETATM 365 N N1 . DA B 1 7 ? 1.178 2.113 5.031 1.00 5.65 ? 17 DA B N1 1 HETATM 366 C C2 . DA B 1 7 ? 1.212 2.780 3.868 1.00 5.86 ? 17 DA B C2 1 HETATM 367 N N3 . DA B 1 7 ? 0.472 3.809 3.457 1.00 5.97 ? 17 DA B N3 1 HETATM 368 C C4 . DA B 1 7 ? -0.423 4.147 4.410 1.00 5.68 ? 17 DA B C4 1 HETATM 369 P P . DC B 1 8 ? -5.850 4.605 1.415 1.00 8.75 ? 18 DC B P 1 HETATM 370 O OP1 . DC B 1 8 ? -6.730 4.928 0.276 1.00 12.93 ? 18 DC B OP1 1 HETATM 371 O OP2 . DC B 1 8 ? -6.479 4.382 2.720 1.00 11.49 ? 18 DC B OP2 1 HETATM 372 O "O5'" A DC B 1 8 ? -4.980 3.312 1.052 0.50 9.67 ? 18 DC B "O5'" 1 HETATM 374 C "C5'" A DC B 1 8 ? -4.326 3.201 -0.208 0.50 18.33 ? 18 DC B "C5'" 1 HETATM 376 C "C4'" A DC B 1 8 ? -3.395 1.992 -0.189 0.50 7.63 ? 18 DC B "C4'" 1 HETATM 378 O "O4'" A DC B 1 8 ? -2.311 2.271 0.750 0.50 6.13 ? 18 DC B "O4'" 1 HETATM 380 C "C3'" A DC B 1 8 ? -3.906 0.638 0.289 0.50 6.36 ? 18 DC B "C3'" 1 HETATM 382 O "O3'" A DC B 1 8 ? -4.745 0.062 -0.685 0.50 6.90 ? 18 DC B "O3'" 1 HETATM 384 C "C2'" A DC B 1 8 ? -2.552 -0.024 0.545 0.50 4.15 ? 18 DC B "C2'" 1 HETATM 386 C "C1'" A DC B 1 8 ? -1.815 1.074 1.293 0.50 6.79 ? 18 DC B "C1'" 1 HETATM 388 N N1 . DC B 1 8 ? -2.088 0.995 2.743 1.00 5.94 ? 18 DC B N1 1 HETATM 389 C C2 . DC B 1 8 ? -1.320 0.079 3.454 1.00 5.53 ? 18 DC B C2 1 HETATM 390 O O2 . DC B 1 8 ? -0.464 -0.570 2.845 1.00 6.20 ? 18 DC B O2 1 HETATM 391 N N3 . DC B 1 8 ? -1.531 -0.063 4.785 1.00 5.53 ? 18 DC B N3 1 HETATM 392 C C4 . DC B 1 8 ? -2.510 0.618 5.387 1.00 5.87 ? 18 DC B C4 1 HETATM 393 N N4 . DC B 1 8 ? -2.692 0.431 6.686 1.00 6.96 ? 18 DC B N4 1 HETATM 394 C C5 . DC B 1 8 ? -3.324 1.552 4.679 1.00 6.40 ? 18 DC B C5 1 HETATM 395 C C6 . DC B 1 8 ? -3.077 1.692 3.371 1.00 6.07 ? 18 DC B C6 1 HETATM 396 P P A DG B 1 9 ? -5.394 -1.368 -0.434 0.50 6.03 ? 19 DG B P 1 HETATM 398 O OP1 A DG B 1 9 ? -6.386 -1.588 -1.504 0.50 10.24 ? 19 DG B OP1 1 HETATM 400 O OP2 A DG B 1 9 ? -5.801 -1.496 0.951 0.50 7.31 ? 19 DG B OP2 1 HETATM 402 O "O5'" A DG B 1 9 ? -4.162 -2.301 -0.650 0.50 16.06 ? 19 DG B "O5'" 1 HETATM 404 C "C5'" A DG B 1 9 ? -4.125 -3.645 -0.798 0.50 22.50 ? 19 DG B "C5'" 1 HETATM 406 C "C4'" A DG B 1 9 ? -2.783 -4.124 -0.249 0.50 4.64 ? 19 DG B "C4'" 1 HETATM 408 O "O4'" A DG B 1 9 ? -2.316 -3.216 0.749 0.50 6.27 ? 19 DG B "O4'" 1 HETATM 410 C "C3'" A DG B 1 9 ? -2.908 -5.468 0.394 0.50 4.51 ? 19 DG B "C3'" 1 HETATM 412 O "O3'" A DG B 1 9 ? -2.826 -6.486 -0.621 0.50 8.79 ? 19 DG B "O3'" 1 HETATM 414 C "C2'" A DG B 1 9 ? -1.790 -5.568 1.388 0.50 3.09 ? 19 DG B "C2'" 1 HETATM 416 C "C1'" A DG B 1 9 ? -1.724 -4.162 1.780 0.50 3.64 ? 19 DG B "C1'" 1 HETATM 418 N N9 . DG B 1 9 ? -2.358 -3.762 3.056 1.00 5.17 ? 19 DG B N9 1 HETATM 419 C C8 . DG B 1 9 ? -3.242 -2.728 3.235 1.00 5.72 ? 19 DG B C8 1 HETATM 420 N N7 . DG B 1 9 ? -3.594 -2.570 4.492 1.00 5.81 ? 19 DG B N7 1 HETATM 421 C C5 . DG B 1 9 ? -2.879 -3.533 5.177 1.00 5.12 ? 19 DG B C5 1 HETATM 422 C C6 . DG B 1 9 ? -2.800 -3.847 6.569 1.00 4.99 ? 19 DG B C6 1 HETATM 423 O O6 . DG B 1 9 ? -3.414 -3.301 7.509 1.00 6.20 ? 19 DG B O6 1 HETATM 424 N N1 . DG B 1 9 ? -1.958 -4.914 6.801 1.00 5.03 ? 19 DG B N1 1 HETATM 425 C C2 . DG B 1 9 ? -1.245 -5.621 5.857 1.00 4.92 ? 19 DG B C2 1 HETATM 426 N N2 . DG B 1 9 ? -0.506 -6.630 6.310 1.00 5.16 ? 19 DG B N2 1 HETATM 427 N N3 . DG B 1 9 ? -1.281 -5.323 4.563 1.00 4.95 ? 19 DG B N3 1 HETATM 428 C C4 . DG B 1 9 ? -2.111 -4.279 4.311 1.00 4.86 ? 19 DG B C4 1 HETATM 429 P P . DC B 1 10 ? -3.827 -7.730 -0.547 1.00 7.39 ? 20 DC B P 1 HETATM 430 O OP1 . DC B 1 10 ? -3.528 -8.515 -1.781 1.00 10.52 ? 20 DC B OP1 1 HETATM 431 O OP2 . DC B 1 10 ? -5.200 -7.318 -0.309 1.00 9.09 ? 20 DC B OP2 1 HETATM 432 O "O5'" . DC B 1 10 ? -3.338 -8.510 0.743 1.00 7.10 ? 20 DC B "O5'" 1 HETATM 433 C "C5'" . DC B 1 10 ? -2.082 -9.184 0.769 1.00 6.85 ? 20 DC B "C5'" 1 HETATM 434 C "C4'" . DC B 1 10 ? -1.886 -9.845 2.096 1.00 5.89 ? 20 DC B "C4'" 1 HETATM 435 O "O4'" . DC B 1 10 ? -1.809 -8.845 3.109 1.00 5.69 ? 20 DC B "O4'" 1 HETATM 436 C "C3'" . DC B 1 10 ? -3.027 -10.776 2.575 1.00 6.11 ? 20 DC B "C3'" 1 HETATM 437 O "O3'" . DC B 1 10 ? -2.893 -12.101 2.117 1.00 6.77 ? 20 DC B "O3'" 1 HETATM 438 C "C2'" . DC B 1 10 ? -2.924 -10.707 4.083 1.00 6.12 ? 20 DC B "C2'" 1 HETATM 439 C "C1'" . DC B 1 10 ? -2.345 -9.366 4.353 1.00 5.64 ? 20 DC B "C1'" 1 HETATM 440 N N1 . DC B 1 10 ? -3.277 -8.343 4.869 1.00 5.40 ? 20 DC B N1 1 HETATM 441 C C2 . DC B 1 10 ? -3.487 -8.319 6.251 1.00 5.46 ? 20 DC B C2 1 HETATM 442 O O2 . DC B 1 10 ? -2.925 -9.189 6.930 1.00 5.71 ? 20 DC B O2 1 HETATM 443 N N3 . DC B 1 10 ? -4.256 -7.344 6.779 1.00 5.66 ? 20 DC B N3 1 HETATM 444 C C4 . DC B 1 10 ? -4.870 -6.469 5.972 1.00 5.89 ? 20 DC B C4 1 HETATM 445 N N4 . DC B 1 10 ? -5.635 -5.536 6.565 1.00 6.38 ? 20 DC B N4 1 HETATM 446 C C5 . DC B 1 10 ? -4.742 -6.533 4.557 1.00 5.85 ? 20 DC B C5 1 HETATM 447 C C6 . DC B 1 10 ? -3.917 -7.457 4.043 1.00 5.82 ? 20 DC B C6 1 HETATM 448 MG MG . MG C 2 . ? 0.166 -0.059 11.778 1.00 7.57 ? 301 MG A MG 1 HETATM 449 N N1 . SPM D 3 . ? -1.386 5.560 25.140 1.00 8.58 ? 221 SPM B N1 1 HETATM 450 C C2 . SPM D 3 . ? -2.248 4.344 25.282 1.00 8.70 ? 221 SPM B C2 1 HETATM 451 C C3 . SPM D 3 . ? -1.844 3.214 24.376 1.00 8.60 ? 221 SPM B C3 1 HETATM 452 C C4 . SPM D 3 . ? -2.834 2.063 24.495 1.00 9.59 ? 221 SPM B C4 1 HETATM 453 N N5 . SPM D 3 . ? -2.313 0.871 23.720 1.00 8.63 ? 221 SPM B N5 1 HETATM 454 C C6 . SPM D 3 . ? -3.235 -0.310 23.760 1.00 9.66 ? 221 SPM B C6 1 HETATM 455 C C7 . SPM D 3 . ? -2.669 -1.391 22.871 1.00 14.32 ? 221 SPM B C7 1 HETATM 456 C C8 . SPM D 3 . ? -3.306 -2.753 23.219 1.00 17.93 ? 221 SPM B C8 1 HETATM 457 C C9 . SPM D 3 . ? -2.886 -3.777 22.188 0.50 28.99 ? 221 SPM B C9 1 HETATM 458 N N10 . SPM D 3 . ? -3.212 -5.172 22.585 0.50 12.92 ? 221 SPM B N10 1 HETATM 459 C C11 . SPM D 3 . ? -2.084 -5.778 23.391 0.50 26.23 ? 221 SPM B C11 1 HETATM 460 C C12 . SPM D 3 . ? -2.443 -7.162 23.912 0.50 20.65 ? 221 SPM B C12 1 HETATM 461 C C13 . SPM D 3 . ? -1.448 -8.158 23.367 0.50 29.45 ? 221 SPM B C13 1 HETATM 462 N N14 . SPM D 3 . ? -0.553 -8.726 24.427 0.50 22.12 ? 221 SPM B N14 1 HETATM 463 C C4 . SPM E 3 . ? -4.802 0.578 -4.853 0.50 14.17 ? 222 SPM B C4 1 HETATM 464 N N5 . SPM E 3 . ? -4.355 -0.649 -4.103 0.50 17.85 ? 222 SPM B N5 1 HETATM 465 C C6 . SPM E 3 . ? -4.284 -1.865 -4.963 0.50 7.08 ? 222 SPM B C6 1 HETATM 466 C C7 . SPM E 3 . ? -3.846 -3.073 -4.176 0.50 8.54 ? 222 SPM B C7 1 HETATM 467 C C8 . SPM E 3 . ? -3.885 -4.400 -4.941 0.50 10.86 ? 222 SPM B C8 1 HETATM 468 C C9 . SPM E 3 . ? -3.334 -5.562 -4.156 0.50 9.76 ? 222 SPM B C9 1 HETATM 469 N N10 . SPM E 3 . ? -3.668 -6.856 -4.805 0.50 11.53 ? 222 SPM B N10 1 HETATM 470 C C11 . SPM E 3 . ? -2.836 -8.025 -4.341 0.50 8.03 ? 222 SPM B C11 1 HETATM 471 C C12 . SPM E 3 . ? -3.207 -9.270 -5.137 0.50 14.31 ? 222 SPM B C12 1 HETATM 472 C C13 . SPM E 3 . ? -2.260 -10.403 -4.840 0.50 19.55 ? 222 SPM B C13 1 HETATM 473 MG MG . MG F 2 . ? -9.567 8.072 8.595 0.50 17.72 ? 1301 MG B MG 1
spin
Assembly
Assembly ID: 1dpl_1
Assembly defined by
: Author
PDB ID
:
1dpl
Experimental method
: X-RAY DIFFRACTION
Resolution
: 0.83 Å
UniProt ID
: N/A
PubMed ID
:
10699842
Ligand 1
:
MG
Ligand 2
:
SPM
Ligand 3
:
SPM
Ligand 4
:
MG
Ligand 5
:
DNA
Download
mmCIF Format
PDB Format
Ligand ID
NUC pairing detail
Ligand Name
Synonyms
Formula
2D structure
MG
N/A
Magnesium(2+)
1: Magnesium, doubly charged positive ion; 2: Magnesium(ii) cation; 3: Magnesium, ion (mg(2+)); 4: Magnesium(2+) ion; 5: Mg2+; 6: Magnesium cation; 7: Mg(2+); 8: Magnesium ion; 9: Mg;
Mg
SPM
N/A
Spermine
1: N,n'-bis(3-aminopropyl)butane-1,4-diamine; 2: 4,9-diaza-1,12-dodecanediamine; 3: 4,9-diazadodecane-1,12-diamine; 4: N,n'-bis(3-aminopropyl)-1,4-butanediamine;
"C10 H26 N4"
SPM
N/A
Spermine
1: N,n'-bis(3-aminopropyl)butane-1,4-diamine; 2: 4,9-diaza-1,12-dodecanediamine; 3: 4,9-diazadodecane-1,12-diamine; 4: N,n'-bis(3-aminopropyl)-1,4-butanediamine;
"C10 H26 N4"
MG
N/A
Magnesium(2+)
1: Magnesium, doubly charged positive ion; 2: Magnesium(ii) cation; 3: Magnesium, ion (mg(2+)); 4: Magnesium(2+) ion; 5: Mg2+; 6: Magnesium cation; 7: Mg(2+); 8: Magnesium ion; 9: Mg;
Mg
DNA
B:DNA A:DNA
Deoxyribonucleic acid
N/A
"C11 H8 O4"
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)
