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Yang Lab
Function Annotation for BL3153248
3D View
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data_1ao2_1 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 N NA . PMY A 1 . ? 9.787 -11.718 25.336 1.00 0.00 ? 1 PMY A NA 1 HETATM 2 C C1 . PMY A 1 . ? 11.082 -11.541 25.037 1.00 0.00 ? 1 PMY A C1 1 HETATM 3 O O1 . PMY A 1 . ? 11.969 -11.707 25.867 1.00 0.00 ? 1 PMY A O1 1 HETATM 4 C C2 . PMY A 1 . ? 11.472 -11.125 23.613 1.00 0.00 ? 1 PMY A C2 1 HETATM 5 N NB . PMY A 1 . ? 12.867 -10.624 23.515 1.00 0.00 ? 1 PMY A NB 1 HETATM 6 C C3 . PMY A 1 . ? 11.531 -12.406 22.752 1.00 0.00 ? 1 PMY A C3 1 HETATM 7 N NC . PMY A 1 . ? 11.907 -12.054 21.349 1.00 0.00 ? 1 PMY A NC 1 HETATM 8 N ND . PMY A 1 . ? 8.048 -9.490 19.613 1.00 0.00 ? 1 PMY A ND 1 HETATM 9 C C4 . PMY A 1 . ? 8.912 -10.456 19.299 1.00 0.00 ? 1 PMY A C4 1 HETATM 10 O O4 . PMY A 1 . ? 9.243 -10.660 18.134 1.00 0.00 ? 1 PMY A O4 1 HETATM 11 C C5 . PMY A 1 . ? 9.501 -11.320 20.418 1.00 0.00 ? 1 PMY A C5 1 HETATM 12 C C6 . PMY A 1 . ? 11.068 -11.201 20.408 1.00 0.00 ? 1 PMY A C6 1 HETATM 13 C C7 . PMY A 1 . ? 11.606 -9.780 20.355 1.00 0.00 ? 1 PMY A C7 1 HETATM 14 N NE . PMY A 1 . ? 11.105 -8.714 19.661 1.00 0.00 ? 1 PMY A NE 1 HETATM 15 C C8 . PMY A 1 . ? 11.788 -7.516 19.622 1.00 0.00 ? 1 PMY A C8 1 HETATM 16 N NG . PMY A 1 . ? 12.762 -9.604 20.974 1.00 0.00 ? 1 PMY A NG 1 HETATM 17 C C10 . PMY A 1 . ? 13.467 -8.473 20.962 1.00 0.00 ? 1 PMY A C10 1 HETATM 18 C C9 . PMY A 1 . ? 12.999 -7.392 20.267 1.00 0.00 ? 1 PMY A C9 1 HETATM 19 N NF . PMY A 1 . ? 11.206 -6.537 18.910 1.00 0.00 ? 1 PMY A NF 1 HETATM 20 C CA . PMY A 1 . ? 13.817 -6.118 20.226 1.00 0.00 ? 1 PMY A CA 1 HETATM 21 C C12 . PMY A 1 . ? 14.767 -8.596 21.632 1.00 0.00 ? 1 PMY A C12 1 HETATM 22 O O12 . PMY A 1 . ? 15.522 -7.635 21.748 1.00 0.00 ? 1 PMY A O12 1 HETATM 23 N NH . PMY A 1 . ? 15.093 -9.812 22.100 1.00 0.00 ? 1 PMY A NH 1 HETATM 24 C C13 . PMY A 1 . ? 16.360 -10.099 22.792 1.00 0.00 ? 1 PMY A C13 1 HETATM 25 C C14 . PMY A 1 . ? 16.113 -11.226 23.818 1.00 0.00 ? 1 PMY A C14 1 HETATM 26 O OH1 . PMY A 1 . ? 15.187 -10.604 24.698 1.00 0.00 ? 1 PMY A OH1 1 HETATM 27 C C27 . PMY A 1 . ? 15.530 -12.550 23.379 1.00 0.00 ? 1 PMY A C27 1 HETATM 28 N NJ . PMY A 1 . ? 14.352 -12.709 22.765 1.00 0.00 ? 1 PMY A NJ 1 HETATM 29 C C28 . PMY A 1 . ? 16.081 -13.774 23.499 1.00 0.00 ? 1 PMY A C28 1 HETATM 30 C C29 . PMY A 1 . ? 14.182 -14.021 22.531 1.00 0.00 ? 1 PMY A C29 1 HETATM 31 N NI . PMY A 1 . ? 15.252 -14.677 22.965 1.00 0.00 ? 1 PMY A NI 1 HETATM 32 C C30 . PMY A 1 . ? 17.501 -10.535 21.868 1.00 0.00 ? 1 PMY A C30 1 HETATM 33 O O30 . PMY A 1 . ? 18.603 -10.780 22.354 1.00 0.00 ? 1 PMY A O30 1 HETATM 34 N NK . PMY A 1 . ? 17.245 -10.717 20.574 1.00 0.00 ? 1 PMY A NK 1 HETATM 35 C C31 . PMY A 1 . ? 18.138 -11.213 19.550 1.00 0.00 ? 1 PMY A C31 1 HETATM 36 C CB . PMY A 1 . ? 18.594 -9.977 18.704 1.00 0.00 ? 1 PMY A CB 1 HETATM 37 C C33 . PMY A 1 . ? 17.271 -12.204 18.694 1.00 0.00 ? 1 PMY A C33 1 HETATM 38 O OH2 . PMY A 1 . ? 18.026 -12.594 17.579 1.00 0.00 ? 1 PMY A OH2 1 HETATM 39 C C34 . PMY A 1 . ? 16.886 -13.502 19.477 1.00 0.00 ? 1 PMY A C34 1 HETATM 40 C CC . PMY A 1 . ? 18.161 -14.440 19.572 1.00 0.00 ? 1 PMY A CC 1 HETATM 41 C C36 . PMY A 1 . ? 15.717 -14.355 18.900 1.00 0.00 ? 1 PMY A C36 1 HETATM 42 O O36 . PMY A 1 . ? 15.767 -15.577 19.038 1.00 0.00 ? 1 PMY A O36 1 HETATM 43 N NL . PMY A 1 . ? 14.664 -13.795 18.281 1.00 0.00 ? 1 PMY A NL 1 HETATM 44 C C37 . PMY A 1 . ? 13.496 -14.514 17.732 1.00 0.00 ? 1 PMY A C37 1 HETATM 45 C C38 . PMY A 1 . ? 12.538 -15.137 18.804 1.00 0.00 ? 1 PMY A C38 1 HETATM 46 O OH3 . PMY A 1 . ? 12.287 -14.232 19.891 1.00 0.00 ? 1 PMY A OH3 1 HETATM 47 C CD . PMY A 1 . ? 12.989 -16.507 19.423 1.00 0.00 ? 1 PMY A CD 1 HETATM 48 C C40 . PMY A 1 . ? 12.627 -13.663 16.786 1.00 0.00 ? 1 PMY A C40 1 HETATM 49 O O40 . PMY A 1 . ? 12.062 -14.262 15.871 1.00 0.00 ? 1 PMY A O40 1 HETATM 50 N NM . PMY A 1 . ? 12.474 -12.333 16.936 1.00 0.00 ? 1 PMY A NM 1 HETATM 51 C C41 . PMY A 1 . ? 11.661 -11.539 16.005 1.00 0.00 ? 1 PMY A C41 1 HETATM 52 C C42 . PMY A 1 . ? 12.515 -11.235 14.769 1.00 0.00 ? 1 PMY A C42 1 HETATM 53 C C43 . PMY A 1 . ? 13.577 -10.246 15.133 1.00 0.00 ? 1 PMY A C43 1 HETATM 54 S S43 . PMY A 1 . ? 15.327 -10.606 15.236 1.00 0.00 ? 1 PMY A S43 1 HETATM 55 C C44 . PMY A 1 . ? 15.545 -8.864 15.682 1.00 0.00 ? 1 PMY A C44 1 HETATM 56 N NN . PMY A 1 . ? 13.296 -8.970 15.418 1.00 0.00 ? 1 PMY A NN 1 HETATM 57 C C45 . PMY A 1 . ? 14.360 -8.201 15.709 1.00 0.00 ? 1 PMY A C45 1 HETATM 58 C C46 . PMY A 1 . ? 14.215 -6.876 15.940 1.00 0.00 ? 1 PMY A C46 1 HETATM 59 S S46 . PMY A 1 . ? 12.621 -6.039 15.913 1.00 0.00 ? 1 PMY A S46 1 HETATM 60 C C47 . PMY A 1 . ? 13.502 -4.492 16.244 1.00 0.00 ? 1 PMY A C47 1 HETATM 61 N NO . PMY A 1 . ? 15.213 -6.010 16.169 1.00 0.00 ? 1 PMY A NO 1 HETATM 62 C C48 . PMY A 1 . ? 14.836 -4.720 16.323 1.00 0.00 ? 1 PMY A C48 1 HETATM 63 C C49 . PMY A 1 . ? 15.868 -3.685 16.534 1.00 0.00 ? 1 PMY A C49 1 HETATM 64 O O49 . PMY A 1 . ? 17.034 -4.073 16.573 1.00 0.00 ? 1 PMY A O49 1 HETATM 65 N NP . PMY A 1 . ? 15.596 -2.373 16.678 1.00 0.00 ? 1 PMY A NP 1 HETATM 66 C C51 . PMY A 1 . ? 16.658 -1.368 16.830 1.00 0.00 ? 1 PMY A C51 1 HETATM 67 C C52 . PMY A 1 . ? 16.914 -0.949 18.339 1.00 0.00 ? 1 PMY A C52 1 HETATM 68 C C53 . PMY A 1 . ? 16.860 -2.129 19.429 1.00 0.00 ? 1 PMY A C53 1 HETATM 69 N NQ . PMY A 1 . ? 17.832 -3.244 19.144 1.00 0.00 ? 1 PMY A NQ 1 HETATM 70 C CE . PMY A 1 . ? 19.307 -4.654 20.631 1.00 0.00 ? 1 PMY A CE 1 HETATM 71 C C54 . PMY A 1 . ? 19.254 -3.484 19.587 1.00 0.00 ? 1 PMY A C54 1 HETATM 72 C C56 . PMY A 1 . ? 20.126 -3.783 18.327 1.00 0.00 ? 1 PMY A C56 1 HETATM 73 C C57 . PMY A 1 . ? 19.712 -4.751 17.425 1.00 0.00 ? 1 PMY A C57 1 HETATM 74 C C58 . PMY A 1 . ? 20.442 -5.024 16.297 1.00 0.00 ? 1 PMY A C58 1 HETATM 75 C C59 . PMY A 1 . ? 21.602 -4.353 16.038 1.00 0.00 ? 1 PMY A C59 1 HETATM 76 C C60 . PMY A 1 . ? 22.027 -3.395 16.915 1.00 0.00 ? 1 PMY A C60 1 HETATM 77 C C61 . PMY A 1 . ? 21.304 -3.104 18.047 1.00 0.00 ? 1 PMY A C61 1 HETATM 78 H HA1 . PMY A 1 . ? 9.480 -11.977 26.276 1.00 0.00 ? 1 PMY A HA1 1 HETATM 79 H HA2 . PMY A 1 . ? 9.088 -11.583 24.619 1.00 0.00 ? 1 PMY A HA2 1 HETATM 80 H H2 . PMY A 1 . ? 10.822 -10.289 23.296 1.00 0.00 ? 1 PMY A H2 1 HETATM 81 H HB1 . PMY A 1 . ? 13.441 -11.115 24.202 1.00 0.00 ? 1 PMY A HB1 1 HETATM 82 H HB2 . PMY A 1 . ? 12.864 -9.636 23.738 1.00 0.00 ? 1 PMY A HB2 1 HETATM 83 H H3E . PMY A 1 . ? 10.743 -13.171 22.818 1.00 0.00 ? 1 PMY A H3E 1 HETATM 84 H H3X . PMY A 1 . ? 12.355 -12.942 23.236 1.00 0.00 ? 1 PMY A H3X 1 HETATM 85 H HNC . PMY A 1 . ? 12.043 -12.936 20.846 1.00 0.00 ? 1 PMY A HNC 1 HETATM 86 H HD1 . PMY A 1 . ? 7.632 -9.362 20.527 1.00 0.00 ? 1 PMY A HD1 1 HETATM 87 H HD2 . PMY A 1 . ? 7.710 -8.909 18.859 1.00 0.00 ? 1 PMY A HD2 1 HETATM 88 H H5E . PMY A 1 . ? 9.128 -12.323 20.078 1.00 0.00 ? 1 PMY A H5E 1 HETATM 89 H H5X . PMY A 1 . ? 9.082 -10.930 21.377 1.00 0.00 ? 1 PMY A H5X 1 HETATM 90 H H6 . PMY A 1 . ? 11.374 -11.647 19.448 1.00 0.00 ? 1 PMY A H6 1 HETATM 91 H HF1 . PMY A 1 . ? 11.622 -5.625 18.822 1.00 0.00 ? 1 PMY A HF1 1 HETATM 92 H HF2 . PMY A 1 . ? 10.320 -6.710 18.455 1.00 0.00 ? 1 PMY A HF2 1 HETATM 93 H HAA . PMY A 1 . ? 14.814 -6.362 19.848 1.00 0.00 ? 1 PMY A HAA 1 HETATM 94 H HAB . PMY A 1 . ? 13.931 -5.744 21.244 1.00 0.00 ? 1 PMY A HAB 1 HETATM 95 H HAC . PMY A 1 . ? 13.409 -5.336 19.593 1.00 0.00 ? 1 PMY A HAC 1 HETATM 96 H H13 . PMY A 1 . ? 16.685 -9.174 23.280 1.00 0.00 ? 1 PMY A H13 1 HETATM 97 H H14 . PMY A 1 . ? 17.062 -11.421 24.332 1.00 0.00 ? 1 PMY A H14 1 HETATM 98 H HO1 . PMY A 1 . ? 15.550 -9.740 24.930 1.00 0.00 ? 1 PMY A HO1 1 HETATM 99 H H28 . PMY A 1 . ? 17.016 -14.029 23.939 1.00 0.00 ? 1 PMY A H28 1 HETATM 100 H H29 . PMY A 1 . ? 13.360 -14.504 22.065 1.00 0.00 ? 1 PMY A H29 1 HETATM 101 H HNI . PMY A 1 . ? 15.400 -15.676 22.893 1.00 0.00 ? 1 PMY A HNI 1 HETATM 102 H HNK . PMY A 1 . ? 16.327 -10.548 20.227 1.00 0.00 ? 1 PMY A HNK 1 HETATM 103 H H31 . PMY A 1 . ? 18.978 -11.741 20.069 1.00 0.00 ? 1 PMY A H31 1 HETATM 104 H HBA . PMY A 1 . ? 17.726 -9.404 18.357 1.00 0.00 ? 1 PMY A HBA 1 HETATM 105 H HBB . PMY A 1 . ? 19.152 -10.278 17.818 1.00 0.00 ? 1 PMY A HBB 1 HETATM 106 H HBC . PMY A 1 . ? 19.217 -9.271 19.267 1.00 0.00 ? 1 PMY A HBC 1 HETATM 107 H H33 . PMY A 1 . ? 16.400 -11.674 18.273 1.00 0.00 ? 1 PMY A H33 1 HETATM 108 H HO2 . PMY A 1 . ? 17.514 -13.203 17.038 1.00 0.00 ? 1 PMY A HO2 1 HETATM 109 H H34 . PMY A 1 . ? 16.433 -13.097 20.417 1.00 0.00 ? 1 PMY A H34 1 HETATM 110 H HCA . PMY A 1 . ? 18.497 -14.751 18.571 1.00 0.00 ? 1 PMY A HCA 1 HETATM 111 H HCB . PMY A 1 . ? 17.999 -15.398 20.081 1.00 0.00 ? 1 PMY A HCB 1 HETATM 112 H HCC . PMY A 1 . ? 19.049 -13.990 20.025 1.00 0.00 ? 1 PMY A HCC 1 HETATM 113 H HNL . PMY A 1 . ? 14.676 -12.797 18.181 1.00 0.00 ? 1 PMY A HNL 1 HETATM 114 H H37 . PMY A 1 . ? 13.889 -15.283 17.061 1.00 0.00 ? 1 PMY A H37 1 HETATM 115 H H38 . PMY A 1 . ? 11.549 -15.215 18.307 1.00 0.00 ? 1 PMY A H38 1 HETATM 116 H HO3 . PMY A 1 . ? 11.624 -14.632 20.463 1.00 0.00 ? 1 PMY A HO3 1 HETATM 117 H HDA . PMY A 1 . ? 13.833 -16.394 20.111 1.00 0.00 ? 1 PMY A HDA 1 HETATM 118 H HDB . PMY A 1 . ? 13.298 -17.233 18.666 1.00 0.00 ? 1 PMY A HDB 1 HETATM 119 H HDC . PMY A 1 . ? 12.196 -17.002 19.996 1.00 0.00 ? 1 PMY A HDC 1 HETATM 120 H HNM . PMY A 1 . ? 12.956 -11.857 17.683 1.00 0.00 ? 1 PMY A HNM 1 HETATM 121 H H1E . PMY A 1 . ? 11.343 -10.578 16.436 1.00 0.00 ? 1 PMY A H1E 1 HETATM 122 H H1X . PMY A 1 . ? 10.777 -12.125 15.711 1.00 0.00 ? 1 PMY A H1X 1 HETATM 123 H H2E . PMY A 1 . ? 11.945 -10.788 13.949 1.00 0.00 ? 1 PMY A H2E 1 HETATM 124 H H2X . PMY A 1 . ? 12.951 -12.168 14.415 1.00 0.00 ? 1 PMY A H2X 1 HETATM 125 H H44 . PMY A 1 . ? 16.513 -8.431 15.863 1.00 0.00 ? 1 PMY A H44 1 HETATM 126 H H47 . PMY A 1 . ? 12.994 -3.544 16.330 1.00 0.00 ? 1 PMY A H47 1 HETATM 127 H HNP . PMY A 1 . ? 14.640 -2.047 16.665 1.00 0.00 ? 1 PMY A HNP 1 HETATM 128 H H6E . PMY A 1 . ? 16.359 -0.515 16.194 1.00 0.00 ? 1 PMY A H6E 1 HETATM 129 H H6X . PMY A 1 . ? 17.552 -1.709 16.286 1.00 0.00 ? 1 PMY A H6X 1 HETATM 130 H H7E . PMY A 1 . ? 16.181 -0.110 18.502 1.00 0.00 ? 1 PMY A H7E 1 HETATM 131 H H7X . PMY A 1 . ? 17.934 -0.498 18.412 1.00 0.00 ? 1 PMY A H7X 1 HETATM 132 H H8E . PMY A 1 . ? 15.891 -2.642 19.219 1.00 0.00 ? 1 PMY A H8E 1 HETATM 133 H H8X . PMY A 1 . ? 16.889 -1.847 20.540 1.00 0.00 ? 1 PMY A H8X 1 HETATM 134 H HNQ . PMY A 1 . ? 17.635 -3.606 18.213 1.00 0.00 ? 1 PMY A HNQ 1 HETATM 135 H HEA . PMY A 1 . ? 18.952 -5.610 20.240 1.00 0.00 ? 1 PMY A HEA 1 HETATM 136 H HEB . PMY A 1 . ? 18.706 -4.436 21.520 1.00 0.00 ? 1 PMY A HEB 1 HETATM 137 H HEC . PMY A 1 . ? 20.323 -4.829 21.006 1.00 0.00 ? 1 PMY A HEC 1 HETATM 138 H H54 . PMY A 1 . ? 19.600 -2.627 20.191 1.00 0.00 ? 1 PMY A H54 1 HETATM 139 H H57 . PMY A 1 . ? 18.782 -5.318 17.575 1.00 0.00 ? 1 PMY A H57 1 HETATM 140 H H58 . PMY A 1 . ? 20.104 -5.775 15.588 1.00 0.00 ? 1 PMY A H58 1 HETATM 141 H H59 . PMY A 1 . ? 22.185 -4.580 15.133 1.00 0.00 ? 1 PMY A H59 1 HETATM 142 H H60 . PMY A 1 . ? 22.952 -2.872 16.688 1.00 0.00 ? 1 PMY A H60 1 HETATM 143 H H61 . PMY A 1 . ? 21.710 -2.315 18.692 1.00 0.00 ? 1 PMY A H61 1 HETATM 144 CO CO . 3CO B 2 . ? 13.615 -11.085 21.722 1.00 0.00 ? 2 3CO A CO 1 HETATM 145 O O1 . PEO C 3 . ? 14.261 -11.497 19.888 1.00 0.00 ? 3 PEO A O1 1 HETATM 146 O O2 . PEO C 3 . ? 14.547 -10.382 19.008 1.00 0.00 ? 3 PEO A O2 1 HETATM 147 H HO2 . PEO C 3 . ? 13.747 -9.919 18.776 1.00 0.00 ? 3 PEO A HO2 1
spin
Assembly
Assembly ID: 1ao2_1
Assembly defined by
: NMR
PDB ID
:
1ao2
Experimental method
: SOLUTION NMR
Resolution
: N/A
UniProt ID
: N/A
PubMed ID
:
9108252
Ligand 1
:
3CO
Ligand 2
:
PEO
Ligand 3
:
PMY
Download
mmCIF Format
PDB Format
Ligand ID
NUC pairing detail
Ligand Name
Synonyms
Formula
2D structure
3CO
N/A
Cobalt(3+)
1: Co(3+); 2: Cobalt (iii) ion; 3: Cobaltic ion; 4: Co3+; 5: Cobalt(3+) ion; 6: Cobalt(iii) cation; 7: Cobalt, ion (co3+);
Co
PEO
N/A
Hydrogen peroxide
1: Dihydrogen dioxide; 2: Dihydrogen(peroxide); 3: Hooh; 4: Dioxidane; 5: Dihydrogen peroxide; 6: [oh(oh)]; 7: Bis(hydridooxygen)(o--o); 8: Oxydol; 9: H2o2; 10: Perhydrol;
"H2 O2"
PMY
N/A
Aglycon of peplomycin
N/A
"C48 H67 N17 O10 S2"
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)
