Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL8381
3D View
Ligand Information
Binding Information
data_1b2e_1 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 164 N N . PHE B 2 1 ? 30.093 33.608 33.140 1.00 32.54 ? 1 PHE B N 1 ATOM 165 C CA . PHE B 2 1 ? 30.031 34.813 32.263 1.00 32.32 ? 1 PHE B CA 1 ATOM 166 C C . PHE B 2 1 ? 28.707 35.562 32.386 1.00 31.35 ? 1 PHE B C 1 ATOM 167 O O . PHE B 2 1 ? 28.547 36.644 31.818 1.00 32.04 ? 1 PHE B O 1 ATOM 168 C CB . PHE B 2 1 ? 30.245 34.406 30.798 1.00 33.60 ? 1 PHE B CB 1 ATOM 169 C CG . PHE B 2 1 ? 29.193 33.465 30.259 1.00 33.83 ? 1 PHE B CG 1 ATOM 170 C CD1 . PHE B 2 1 ? 29.112 32.151 30.710 1.00 34.09 ? 1 PHE B CD1 1 ATOM 171 C CD2 . PHE B 2 1 ? 28.285 33.894 29.299 1.00 34.08 ? 1 PHE B CD2 1 ATOM 172 C CE1 . PHE B 2 1 ? 28.147 31.280 30.209 1.00 33.81 ? 1 PHE B CE1 1 ATOM 173 C CE2 . PHE B 2 1 ? 27.316 33.028 28.794 1.00 33.89 ? 1 PHE B CE2 1 ATOM 174 C CZ . PHE B 2 1 ? 27.248 31.720 29.252 1.00 33.32 ? 1 PHE B CZ 1 ATOM 175 N N . VAL B 2 2 ? 27.768 34.981 33.131 1.00 29.52 ? 2 VAL B N 1 ATOM 176 C CA . VAL B 2 2 ? 26.435 35.558 33.312 1.00 28.22 ? 2 VAL B CA 1 ATOM 177 C C . VAL B 2 2 ? 26.242 36.512 34.503 1.00 26.96 ? 2 VAL B C 1 ATOM 178 O O . VAL B 2 2 ? 25.517 37.501 34.405 1.00 26.04 ? 2 VAL B O 1 ATOM 179 C CB . VAL B 2 2 ? 25.385 34.426 33.397 1.00 28.90 ? 2 VAL B CB 1 ATOM 180 C CG1 . VAL B 2 2 ? 24.028 34.976 33.784 1.00 29.57 ? 2 VAL B CG1 1 ATOM 181 C CG2 . VAL B 2 2 ? 25.301 33.698 32.063 1.00 28.11 ? 2 VAL B CG2 1 ATOM 182 N N . ASN B 2 3 ? 26.912 36.226 35.612 1.00 25.68 ? 3 ASN B N 1 ATOM 183 C CA . ASN B 2 3 ? 26.771 37.034 36.818 1.00 25.31 ? 3 ASN B CA 1 ATOM 184 C C . ASN B 2 3 ? 27.709 38.230 36.944 1.00 24.82 ? 3 ASN B C 1 ATOM 185 O O . ASN B 2 3 ? 28.590 38.279 37.806 1.00 24.28 ? 3 ASN B O 1 ATOM 186 C CB . ASN B 2 3 ? 26.845 36.120 38.032 1.00 24.80 ? 3 ASN B CB 1 ATOM 187 C CG . ASN B 2 3 ? 25.850 34.981 37.940 1.00 25.18 ? 3 ASN B CG 1 ATOM 188 O OD1 . ASN B 2 3 ? 24.653 35.174 38.154 1.00 24.77 ? 3 ASN B OD1 1 ATOM 189 N ND2 . ASN B 2 3 ? 26.333 33.797 37.567 1.00 24.35 ? 3 ASN B ND2 1 ATOM 190 N N . GLN B 2 4 ? 27.456 39.222 36.098 1.00 24.99 ? 4 GLN B N 1 ATOM 191 C CA . GLN B 2 4 ? 28.236 40.454 36.052 1.00 24.35 ? 4 GLN B CA 1 ATOM 192 C C . GLN B 2 4 ? 27.424 41.507 35.297 1.00 22.26 ? 4 GLN B C 1 ATOM 193 O O . GLN B 2 4 ? 26.281 41.256 34.902 1.00 21.01 ? 4 GLN B O 1 ATOM 194 C CB . GLN B 2 4 ? 29.554 40.203 35.309 1.00 26.39 ? 4 GLN B CB 1 ATOM 195 C CG . GLN B 2 4 ? 29.363 39.690 33.881 1.00 29.44 ? 4 GLN B CG 1 ATOM 196 C CD . GLN B 2 4 ? 30.673 39.442 33.150 1.00 31.84 ? 4 GLN B CD 1 ATOM 197 O OE1 . GLN B 2 4 ? 30.973 38.313 32.757 1.00 33.44 ? 4 GLN B OE1 1 ATOM 198 N NE2 . GLN B 2 4 ? 31.449 40.502 32.946 1.00 33.05 ? 4 GLN B NE2 1 ATOM 199 N N . HIS B 2 5 ? 28.003 42.694 35.137 1.00 20.98 ? 5 HIS B N 1 ATOM 200 C CA . HIS B 2 5 ? 27.350 43.762 34.391 1.00 19.76 ? 5 HIS B CA 1 ATOM 201 C C . HIS B 2 5 ? 27.600 43.443 32.925 1.00 18.22 ? 5 HIS B C 1 ATOM 202 O O . HIS B 2 5 ? 28.751 43.361 32.490 1.00 18.25 ? 5 HIS B O 1 ATOM 203 C CB . HIS B 2 5 ? 27.951 45.127 34.735 1.00 20.50 ? 5 HIS B CB 1 ATOM 204 C CG . HIS B 2 5 ? 27.646 45.587 36.127 1.00 21.22 ? 5 HIS B CG 1 ATOM 205 N ND1 . HIS B 2 5 ? 26.452 46.185 36.465 1.00 22.54 ? 5 HIS B ND1 1 ATOM 206 C CD2 . HIS B 2 5 ? 28.370 45.513 37.266 1.00 21.59 ? 5 HIS B CD2 1 ATOM 207 C CE1 . HIS B 2 5 ? 26.453 46.458 37.758 1.00 22.22 ? 5 HIS B CE1 1 ATOM 208 N NE2 . HIS B 2 5 ? 27.603 46.059 38.268 1.00 22.14 ? 5 HIS B NE2 1 ATOM 209 N N . LEU B 2 6 ? 26.523 43.183 32.195 1.00 16.51 ? 6 LEU B N 1 ATOM 210 C CA . LEU B 2 6 ? 26.600 42.856 30.777 1.00 15.17 ? 6 LEU B CA 1 ATOM 211 C C . LEU B 2 6 ? 25.918 43.961 29.996 1.00 14.74 ? 6 LEU B C 1 ATOM 212 O O . LEU B 2 6 ? 24.713 44.169 30.124 1.00 13.40 ? 6 LEU B O 1 ATOM 213 C CB . LEU B 2 6 ? 25.917 41.512 30.512 1.00 14.64 ? 6 LEU B CB 1 ATOM 214 C CG . LEU B 2 6 ? 26.576 40.298 31.170 1.00 13.90 ? 6 LEU B CG 1 ATOM 215 C CD1 . LEU B 2 6 ? 25.686 39.077 31.057 1.00 14.50 ? 6 LEU B CD1 1 ATOM 216 C CD2 . LEU B 2 6 ? 27.922 40.048 30.520 1.00 14.70 ? 6 LEU B CD2 1 ATOM 217 N N . CYS B 2 7 ? 26.697 44.674 29.190 1.00 14.78 ? 7 CYS B N 1 ATOM 218 C CA . CYS B 2 7 ? 26.158 45.781 28.411 1.00 15.43 ? 7 CYS B CA 1 ATOM 219 C C . CYS B 2 7 ? 26.527 45.687 26.939 1.00 14.81 ? 7 CYS B C 1 ATOM 220 O O . CYS B 2 7 ? 27.571 45.141 26.583 1.00 14.44 ? 7 CYS B O 1 ATOM 221 C CB . CYS B 2 7 ? 26.688 47.113 28.962 1.00 16.52 ? 7 CYS B CB 1 ATOM 222 S SG . CYS B 2 7 ? 26.425 47.400 30.748 1.00 17.67 ? 7 CYS B SG 1 ATOM 223 N N . GLY B 2 8 ? 25.662 46.231 26.089 1.00 13.88 ? 8 GLY B N 1 ATOM 224 C CA . GLY B 2 8 ? 25.921 46.238 24.665 1.00 13.91 ? 8 GLY B CA 1 ATOM 225 C C . GLY B 2 8 ? 26.151 44.880 24.040 1.00 13.20 ? 8 GLY B C 1 ATOM 226 O O . GLY B 2 8 ? 25.374 43.949 24.269 1.00 13.42 ? 8 GLY B O 1 ATOM 227 N N . SER B 2 9 ? 27.216 44.769 23.246 1.00 12.05 ? 9 SER B N 1 ATOM 228 C CA . SER B 2 9 ? 27.545 43.520 22.573 1.00 11.37 ? 9 SER B CA 1 ATOM 229 C C . SER B 2 9 ? 27.817 42.404 23.574 1.00 11.21 ? 9 SER B C 1 ATOM 230 O O . SER B 2 9 ? 27.604 41.233 23.275 1.00 10.83 ? 9 SER B O 1 ATOM 231 C CB . SER B 2 9 ? 28.745 43.700 21.635 1.00 10.86 ? 9 SER B CB 1 ATOM 232 O OG . SER B 2 9 ? 29.925 44.029 22.349 1.00 11.54 ? 9 SER B OG 1 ATOM 233 N N . HIS B 2 10 ? 28.254 42.779 24.772 1.00 11.17 ? 10 HIS B N 1 ATOM 234 C CA . HIS B 2 10 ? 28.546 41.810 25.826 1.00 12.06 ? 10 HIS B CA 1 ATOM 235 C C . HIS B 2 10 ? 27.261 41.131 26.321 1.00 11.39 ? 10 HIS B C 1 ATOM 236 O O . HIS B 2 10 ? 27.259 39.943 26.627 1.00 11.59 ? 10 HIS B O 1 ATOM 237 C CB . HIS B 2 10 ? 29.286 42.487 26.993 1.00 13.43 ? 10 HIS B CB 1 ATOM 238 C CG . HIS B 2 10 ? 30.579 43.138 26.601 1.00 15.31 ? 10 HIS B CG 1 ATOM 239 N ND1 . HIS B 2 10 ? 31.532 43.512 27.526 1.00 16.03 ? 10 HIS B ND1 1 ATOM 240 C CD2 . HIS B 2 10 ? 31.083 43.485 25.389 1.00 15.83 ? 10 HIS B CD2 1 ATOM 241 C CE1 . HIS B 2 10 ? 32.563 44.056 26.903 1.00 15.80 ? 10 HIS B CE1 1 ATOM 242 N NE2 . HIS B 2 10 ? 32.317 44.052 25.606 1.00 15.77 ? 10 HIS B NE2 1 ATOM 243 N N . LEU B 2 11 ? 26.174 41.892 26.391 1.00 12.01 ? 11 LEU B N 1 ATOM 244 C CA . LEU B 2 11 ? 24.880 41.366 26.825 1.00 11.89 ? 11 LEU B CA 1 ATOM 245 C C . LEU B 2 11 ? 24.277 40.504 25.723 1.00 11.95 ? 11 LEU B C 1 ATOM 246 O O . LEU B 2 11 ? 23.711 39.445 25.994 1.00 11.68 ? 11 LEU B O 1 ATOM 247 C CB . LEU B 2 11 ? 23.924 42.517 27.185 1.00 12.63 ? 11 LEU B CB 1 ATOM 248 C CG . LEU B 2 11 ? 22.481 42.220 27.617 1.00 12.78 ? 11 LEU B CG 1 ATOM 249 C CD1 . LEU B 2 11 ? 22.464 41.201 28.745 1.00 12.57 ? 11 LEU B CD1 1 ATOM 250 C CD2 . LEU B 2 11 ? 21.804 43.521 28.054 1.00 13.52 ? 11 LEU B CD2 1 ATOM 251 N N . VAL B 2 12 ? 24.401 40.973 24.482 1.00 11.56 ? 12 VAL B N 1 ATOM 252 C CA . VAL B 2 12 ? 23.888 40.267 23.314 1.00 12.21 ? 12 VAL B CA 1 ATOM 253 C C . VAL B 2 12 ? 24.559 38.890 23.150 1.00 11.29 ? 12 VAL B C 1 ATOM 254 O O . VAL B 2 12 ? 23.906 37.891 22.830 1.00 10.44 ? 12 VAL B O 1 ATOM 255 C CB . VAL B 2 12 ? 24.068 41.145 22.052 1.00 13.64 ? 12 VAL B CB 1 ATOM 256 C CG1 . VAL B 2 12 ? 23.813 40.367 20.830 1.00 15.54 ? 12 VAL B CG1 1 ATOM 257 C CG2 . VAL B 2 12 ? 23.103 42.322 22.095 1.00 15.39 ? 12 VAL B CG2 1 ATOM 258 N N . GLU B 2 13 ? 25.857 38.838 23.406 1.00 10.82 ? 13 GLU B N 1 ATOM 259 C CA . GLU B 2 13 ? 26.604 37.592 23.318 1.00 10.72 ? 13 GLU B CA 1 ATOM 260 C C . GLU B 2 13 ? 26.145 36.591 24.381 1.00 10.92 ? 13 GLU B C 1 ATOM 261 O O . GLU B 2 13 ? 26.025 35.397 24.105 1.00 10.51 ? 13 GLU B O 1 ATOM 262 C CB A GLU B 2 13 ? 28.106 37.842 23.409 0.40 11.57 ? 13 GLU B CB 1 ATOM 264 C CG A GLU B 2 13 ? 28.671 38.488 22.153 0.40 12.41 ? 13 GLU B CG 1 ATOM 266 C CD A GLU B 2 13 ? 30.182 38.602 22.157 0.40 12.57 ? 13 GLU B CD 1 ATOM 268 O OE1 A GLU B 2 13 ? 30.794 38.600 23.245 0.40 12.85 ? 13 GLU B OE1 1 ATOM 270 O OE2 A GLU B 2 13 ? 30.758 38.707 21.058 0.40 13.25 ? 13 GLU B OE2 1 ATOM 272 N N . ALA B 2 14 ? 25.858 37.088 25.583 1.00 10.22 ? 14 ALA B N 1 ATOM 273 C CA . ALA B 2 14 ? 25.383 36.254 26.687 1.00 10.20 ? 14 ALA B CA 1 ATOM 274 C C . ALA B 2 14 ? 24.036 35.620 26.340 1.00 10.18 ? 14 ALA B C 1 ATOM 275 O O . ALA B 2 14 ? 23.842 34.430 26.563 1.00 10.38 ? 14 ALA B O 1 ATOM 276 C CB . ALA B 2 14 ? 25.269 37.080 27.972 1.00 9.09 ? 14 ALA B CB 1 ATOM 277 N N . LEU B 2 15 ? 23.114 36.417 25.795 1.00 10.54 ? 15 LEU B N 1 ATOM 278 C CA . LEU B 2 15 ? 21.797 35.923 25.394 1.00 10.32 ? 15 LEU B CA 1 ATOM 279 C C . LEU B 2 15 ? 21.953 34.867 24.306 1.00 11.18 ? 15 LEU B C 1 ATOM 280 O O . LEU B 2 15 ? 21.252 33.854 24.309 1.00 11.10 ? 15 LEU B O 1 ATOM 281 C CB . LEU B 2 15 ? 20.920 37.067 24.878 1.00 10.04 ? 15 LEU B CB 1 ATOM 282 C CG . LEU B 2 15 ? 20.232 37.957 25.912 1.00 11.59 ? 15 LEU B CG 1 ATOM 283 C CD1 . LEU B 2 15 ? 19.640 39.183 25.249 1.00 11.18 ? 15 LEU B CD1 1 ATOM 284 C CD2 . LEU B 2 15 ? 19.154 37.168 26.617 1.00 12.00 ? 15 LEU B CD2 1 ATOM 285 N N . TYR B 2 16 ? 22.886 35.101 23.384 1.00 10.81 ? 16 TYR B N 1 ATOM 286 C CA . TYR B 2 16 ? 23.148 34.162 22.299 1.00 10.73 ? 16 TYR B CA 1 ATOM 287 C C . TYR B 2 16 ? 23.601 32.799 22.821 1.00 10.34 ? 16 TYR B C 1 ATOM 288 O O . TYR B 2 16 ? 23.111 31.765 22.372 1.00 10.60 ? 16 TYR B O 1 ATOM 289 C CB . TYR B 2 16 ? 24.206 34.733 21.353 1.00 10.51 ? 16 TYR B CB 1 ATOM 290 C CG . TYR B 2 16 ? 24.701 33.747 20.325 1.00 10.50 ? 16 TYR B CG 1 ATOM 291 C CD1 . TYR B 2 16 ? 23.879 33.327 19.278 1.00 10.90 ? 16 TYR B CD1 1 ATOM 292 C CD2 . TYR B 2 16 ? 25.992 33.229 20.402 1.00 10.78 ? 16 TYR B CD2 1 ATOM 293 C CE1 . TYR B 2 16 ? 24.329 32.414 18.334 1.00 11.49 ? 16 TYR B CE1 1 ATOM 294 C CE2 . TYR B 2 16 ? 26.455 32.317 19.464 1.00 11.67 ? 16 TYR B CE2 1 ATOM 295 C CZ . TYR B 2 16 ? 25.617 31.915 18.433 1.00 11.94 ? 16 TYR B CZ 1 ATOM 296 O OH . TYR B 2 16 ? 26.077 31.017 17.503 1.00 13.46 ? 16 TYR B OH 1 ATOM 297 N N . LEU B 2 17 ? 24.538 32.812 23.767 1.00 10.93 ? 17 LEU B N 1 ATOM 298 C CA . LEU B 2 17 ? 25.076 31.586 24.359 1.00 11.85 ? 17 LEU B CA 1 ATOM 299 C C . LEU B 2 17 ? 24.078 30.866 25.258 1.00 12.38 ? 17 LEU B C 1 ATOM 300 O O . LEU B 2 17 ? 23.967 29.640 25.219 1.00 13.47 ? 17 LEU B O 1 ATOM 301 C CB . LEU B 2 17 ? 26.358 31.891 25.147 1.00 11.45 ? 17 LEU B CB 1 ATOM 302 C CG . LEU B 2 17 ? 27.585 32.261 24.309 1.00 12.44 ? 17 LEU B CG 1 ATOM 303 C CD1 . LEU B 2 17 ? 28.749 32.698 25.190 1.00 13.39 ? 17 LEU B CD1 1 ATOM 304 C CD2 . LEU B 2 17 ? 27.987 31.078 23.455 1.00 13.69 ? 17 LEU B CD2 1 ATOM 305 N N . VAL B 2 18 ? 23.338 31.627 26.053 1.00 12.18 ? 18 VAL B N 1 ATOM 306 C CA . VAL B 2 18 ? 22.365 31.038 26.963 1.00 13.31 ? 18 VAL B CA 1 ATOM 307 C C . VAL B 2 18 ? 21.121 30.496 26.259 1.00 14.11 ? 18 VAL B C 1 ATOM 308 O O . VAL B 2 18 ? 20.710 29.365 26.510 1.00 14.45 ? 18 VAL B O 1 ATOM 309 C CB . VAL B 2 18 ? 21.950 32.046 28.070 1.00 13.27 ? 18 VAL B CB 1 ATOM 310 C CG1 . VAL B 2 18 ? 20.743 31.534 28.845 1.00 13.93 ? 18 VAL B CG1 1 ATOM 311 C CG2 . VAL B 2 18 ? 23.116 32.283 29.022 1.00 12.67 ? 18 VAL B CG2 1 ATOM 312 N N . CYS B 2 19 ? 20.547 31.276 25.352 1.00 13.89 ? 19 CYS B N 1 ATOM 313 C CA . CYS B 2 19 ? 19.326 30.856 24.668 1.00 14.88 ? 19 CYS B CA 1 ATOM 314 C C . CYS B 2 19 ? 19.497 29.806 23.588 1.00 15.57 ? 19 CYS B C 1 ATOM 315 O O . CYS B 2 19 ? 18.558 29.075 23.289 1.00 15.91 ? 19 CYS B O 1 ATOM 316 C CB . CYS B 2 19 ? 18.567 32.066 24.112 1.00 14.00 ? 19 CYS B CB 1 ATOM 317 S SG . CYS B 2 19 ? 18.117 33.299 25.377 1.00 13.28 ? 19 CYS B SG 1 ATOM 318 N N . GLY B 2 20 ? 20.683 29.745 22.992 1.00 17.10 ? 20 GLY B N 1 ATOM 319 C CA . GLY B 2 20 ? 20.941 28.757 21.957 1.00 19.92 ? 20 GLY B CA 1 ATOM 320 C C . GLY B 2 20 ? 19.986 28.780 20.774 1.00 21.06 ? 20 GLY B C 1 ATOM 321 O O . GLY B 2 20 ? 19.675 29.840 20.234 1.00 21.14 ? 20 GLY B O 1 ATOM 322 N N . GLU B 2 21 ? 19.514 27.600 20.380 1.00 22.76 ? 21 GLU B N 1 ATOM 323 C CA . GLU B 2 21 ? 18.597 27.454 19.254 1.00 24.44 ? 21 GLU B CA 1 ATOM 324 C C . GLU B 2 21 ? 17.220 28.049 19.467 1.00 23.44 ? 21 GLU B C 1 ATOM 325 O O . GLU B 2 21 ? 16.428 28.133 18.532 1.00 23.55 ? 21 GLU B O 1 ATOM 326 C CB . GLU B 2 21 ? 18.474 25.987 18.841 1.00 28.84 ? 21 GLU B CB 1 ATOM 327 C CG . GLU B 2 21 ? 19.755 25.424 18.227 1.00 35.87 ? 21 GLU B CG 1 ATOM 328 C CD . GLU B 2 21 ? 20.352 26.336 17.151 1.00 40.15 ? 21 GLU B CD 1 ATOM 329 O OE1 . GLU B 2 21 ? 19.598 26.792 16.254 1.00 42.68 ? 21 GLU B OE1 1 ATOM 330 O OE2 . GLU B 2 21 ? 21.576 26.606 17.211 1.00 42.33 ? 21 GLU B OE2 1 ATOM 331 N N . ARG B 2 22 ? 16.924 28.437 20.701 1.00 22.94 ? 22 ARG B N 1 ATOM 332 C CA . ARG B 2 22 ? 15.646 29.062 21.017 1.00 22.42 ? 22 ARG B CA 1 ATOM 333 C C . ARG B 2 22 ? 15.627 30.495 20.479 1.00 21.54 ? 22 ARG B C 1 ATOM 334 O O . ARG B 2 22 ? 14.572 31.023 20.117 1.00 22.08 ? 22 ARG B O 1 ATOM 335 C CB . ARG B 2 22 ? 15.437 29.123 22.529 1.00 22.52 ? 22 ARG B CB 1 ATOM 336 C CG . ARG B 2 22 ? 14.934 27.854 23.162 1.00 24.77 ? 22 ARG B CG 1 ATOM 337 C CD . ARG B 2 22 ? 14.684 28.082 24.643 1.00 26.67 ? 22 ARG B CD 1 ATOM 338 N NE . ARG B 2 22 ? 15.930 28.189 25.402 1.00 29.16 ? 22 ARG B NE 1 ATOM 339 C CZ . ARG B 2 22 ? 16.008 28.568 26.675 1.00 30.46 ? 22 ARG B CZ 1 ATOM 340 N NH1 . ARG B 2 22 ? 14.906 28.892 27.344 1.00 30.68 ? 22 ARG B NH1 1 ATOM 341 N NH2 . ARG B 2 22 ? 17.184 28.572 27.296 1.00 29.84 ? 22 ARG B NH2 1 ATOM 342 N N . GLY B 2 23 ? 16.799 31.115 20.408 1.00 19.53 ? 23 GLY B N 1 ATOM 343 C CA . GLY B 2 23 ? 16.865 32.489 19.967 1.00 18.43 ? 23 GLY B CA 1 ATOM 344 C C . GLY B 2 23 ? 16.467 33.383 21.131 1.00 17.78 ? 23 GLY B C 1 ATOM 345 O O . GLY B 2 23 ? 16.218 32.900 22.241 1.00 17.67 ? 23 GLY B O 1 ATOM 346 N N . PHE B 2 24 ? 16.350 34.680 20.875 1.00 16.28 ? 24 PHE B N 1 ATOM 347 C CA . PHE B 2 24 ? 16.003 35.628 21.925 1.00 15.70 ? 24 PHE B CA 1 ATOM 348 C C . PHE B 2 24 ? 15.581 36.950 21.329 1.00 16.28 ? 24 PHE B C 1 ATOM 349 O O . PHE B 2 24 ? 15.622 37.145 20.115 1.00 15.83 ? 24 PHE B O 1 ATOM 350 C CB . PHE B 2 24 ? 17.231 35.882 22.819 1.00 14.51 ? 24 PHE B CB 1 ATOM 351 C CG . PHE B 2 24 ? 18.434 36.424 22.070 1.00 13.44 ? 24 PHE B CG 1 ATOM 352 C CD1 . PHE B 2 24 ? 19.349 35.562 21.475 1.00 13.00 ? 24 PHE B CD1 1 ATOM 353 C CD2 . PHE B 2 24 ? 18.645 37.795 21.960 1.00 14.31 ? 24 PHE B CD2 1 ATOM 354 C CE1 . PHE B 2 24 ? 20.456 36.049 20.783 1.00 12.83 ? 24 PHE B CE1 1 ATOM 355 C CE2 . PHE B 2 24 ? 19.752 38.296 21.267 1.00 14.08 ? 24 PHE B CE2 1 ATOM 356 C CZ . PHE B 2 24 ? 20.659 37.417 20.677 1.00 13.79 ? 24 PHE B CZ 1 ATOM 357 N N . PHE B 2 25 ? 15.195 37.870 22.197 1.00 17.11 ? 25 PHE B N 1 ATOM 358 C CA . PHE B 2 25 ? 14.839 39.203 21.760 1.00 19.37 ? 25 PHE B CA 1 ATOM 359 C C . PHE B 2 25 ? 15.601 40.197 22.628 1.00 20.09 ? 25 PHE B C 1 ATOM 360 O O . PHE B 2 25 ? 15.808 39.960 23.820 1.00 19.81 ? 25 PHE B O 1 ATOM 361 C CB . PHE B 2 25 ? 13.317 39.438 21.769 1.00 21.01 ? 25 PHE B CB 1 ATOM 362 C CG . PHE B 2 25 ? 12.664 39.248 23.101 1.00 23.80 ? 25 PHE B CG 1 ATOM 363 C CD1 . PHE B 2 25 ? 12.184 37.998 23.485 1.00 24.85 ? 25 PHE B CD1 1 ATOM 364 C CD2 . PHE B 2 25 ? 12.481 40.330 23.961 1.00 25.50 ? 25 PHE B CD2 1 ATOM 365 C CE1 . PHE B 2 25 ? 11.531 37.828 24.709 1.00 26.21 ? 25 PHE B CE1 1 ATOM 366 C CE2 . PHE B 2 25 ? 11.828 40.173 25.188 1.00 26.25 ? 25 PHE B CE2 1 ATOM 367 C CZ . PHE B 2 25 ? 11.350 38.919 25.560 1.00 26.11 ? 25 PHE B CZ 1 ATOM 368 N N . TYR B 2 26 ? 16.135 41.233 21.991 1.00 20.63 ? 26 TYR B N 1 ATOM 369 C CA . TYR B 2 26 ? 16.893 42.269 22.680 1.00 22.25 ? 26 TYR B CA 1 ATOM 370 C C . TYR B 2 26 ? 16.171 43.595 22.505 1.00 23.71 ? 26 TYR B C 1 ATOM 371 O O . TYR B 2 26 ? 16.064 44.108 21.396 1.00 22.94 ? 26 TYR B O 1 ATOM 372 C CB . TYR B 2 26 ? 18.309 42.358 22.102 1.00 21.79 ? 26 TYR B CB 1 ATOM 373 C CG . TYR B 2 26 ? 19.170 43.460 22.696 1.00 22.70 ? 26 TYR B CG 1 ATOM 374 C CD1 . TYR B 2 26 ? 19.430 43.512 24.069 1.00 22.80 ? 26 TYR B CD1 1 ATOM 375 C CD2 . TYR B 2 26 ? 19.754 44.429 21.879 1.00 22.03 ? 26 TYR B CD2 1 ATOM 376 C CE1 . TYR B 2 26 ? 20.256 44.503 24.614 1.00 23.16 ? 26 TYR B CE1 1 ATOM 377 C CE2 . TYR B 2 26 ? 20.580 45.421 22.413 1.00 22.63 ? 26 TYR B CE2 1 ATOM 378 C CZ . TYR B 2 26 ? 20.828 45.453 23.779 1.00 23.33 ? 26 TYR B CZ 1 ATOM 379 O OH . TYR B 2 26 ? 21.652 46.426 24.306 1.00 24.24 ? 26 TYR B OH 1 ATOM 380 N N . THR B 2 27 ? 15.662 44.126 23.609 1.00 26.25 ? 27 THR B N 1 ATOM 381 C CA . THR B 2 27 ? 14.939 45.392 23.613 1.00 29.44 ? 27 THR B CA 1 ATOM 382 C C . THR B 2 27 ? 15.604 46.325 24.621 1.00 31.60 ? 27 THR B C 1 ATOM 383 O O . THR B 2 27 ? 15.263 46.318 25.802 1.00 31.34 ? 27 THR B O 1 ATOM 384 C CB . THR B 2 27 ? 13.464 45.184 24.010 1.00 29.97 ? 27 THR B CB 1 ATOM 385 O OG1 . THR B 2 27 ? 12.846 44.274 23.091 1.00 30.79 ? 27 THR B OG1 1 ATOM 386 C CG2 . THR B 2 27 ? 12.714 46.498 23.975 1.00 31.06 ? 27 THR B CG2 1 ATOM 387 N N . PRO B 2 28 ? 16.555 47.150 24.155 1.00 34.11 ? 28 PRO B N 1 ATOM 388 C CA . PRO B 2 28 ? 17.313 48.111 24.964 1.00 36.94 ? 28 PRO B CA 1 ATOM 389 C C . PRO B 2 28 ? 16.420 49.129 25.650 1.00 40.42 ? 28 PRO B C 1 ATOM 390 O O . PRO B 2 28 ? 16.745 49.629 26.724 1.00 41.09 ? 28 PRO B O 1 ATOM 391 C CB . PRO B 2 28 ? 18.196 48.808 23.928 1.00 36.09 ? 28 PRO B CB 1 ATOM 392 C CG . PRO B 2 28 ? 18.287 47.832 22.817 1.00 35.24 ? 28 PRO B CG 1 ATOM 393 C CD . PRO B 2 28 ? 16.912 47.278 22.735 1.00 33.93 ? 28 PRO B CD 1 ATOM 394 N N . LYS B 2 29 ? 15.316 49.460 24.991 1.00 44.58 ? 29 LYS B N 1 ATOM 395 C CA . LYS B 2 29 ? 14.359 50.430 25.498 1.00 49.12 ? 29 LYS B CA 1 ATOM 396 C C . LYS B 2 29 ? 13.042 49.748 25.861 1.00 51.25 ? 29 LYS B C 1 ATOM 397 O O . LYS B 2 29 ? 12.065 49.826 25.114 1.00 51.90 ? 29 LYS B O 1 ATOM 398 C CB . LYS B 2 29 ? 14.109 51.513 24.440 1.00 50.77 ? 29 LYS B CB 1 ATOM 399 C CG . LYS B 2 29 ? 14.762 52.868 24.719 1.00 53.51 ? 29 LYS B CG 1 ATOM 400 C CD . LYS B 2 29 ? 16.286 52.841 24.626 1.00 55.30 ? 29 LYS B CD 1 ATOM 401 C CE . LYS B 2 29 ? 16.862 54.235 24.882 1.00 56.50 ? 29 LYS B CE 1 ATOM 402 N NZ . LYS B 2 29 ? 18.353 54.261 24.897 1.00 57.30 ? 29 LYS B NZ 1 ATOM 403 N N . ALA B 2 30 ? 13.020 49.064 27.000 1.00 53.73 ? 30 ALA B N 1 ATOM 404 C CA . ALA B 2 30 ? 11.812 48.376 27.451 1.00 55.71 ? 30 ALA B CA 1 ATOM 405 C C . ALA B 2 30 ? 11.243 49.013 28.719 1.00 57.05 ? 30 ALA B C 1 ATOM 406 O O . ALA B 2 30 ? 11.889 48.901 29.789 1.00 57.72 ? 30 ALA B O 1 ATOM 407 C CB . ALA B 2 30 ? 12.095 46.895 27.676 1.00 55.91 ? 30 ALA B CB 1 ATOM 408 O OXT . ALA B 2 30 ? 10.154 49.623 28.621 1.00 58.22 ? 30 ALA B OXT 1 HETATM 409 S S . SO4 C 3 . ? 33.760 36.255 29.970 0.46 34.94 ? 100 SO4 B S 1 HETATM 410 O O1 . SO4 C 3 . ? 33.271 35.422 28.854 0.46 36.76 ? 100 SO4 B O1 1 HETATM 411 O O2 . SO4 C 3 . ? 33.061 37.554 29.944 0.46 36.33 ? 100 SO4 B O2 1 HETATM 412 O O3 . SO4 C 3 . ? 35.213 36.469 29.822 0.46 36.15 ? 100 SO4 B O3 1 HETATM 413 O O4 . SO4 C 3 . ? 33.492 35.587 31.260 0.46 35.76 ? 100 SO4 B O4 1
Spin
Binding residue
Residue number in mmCIF file:
B:
F1
Residue number in PDB file:
A:
F1
Receptor
Assembly ID: 1b2e_1
Stoichiometry type
: Monomer -A1
Assembly defined by
: Author and software
PDB ID
:
1b2e
Experimental method
: X-RAY DIFFRACTION
Resolution
: 1.9 Å
UniProt ID
:
P01315
PubMed ID
:
12657786
Ligand
Ligand ID
:
SO4
Ligand name
: Sulfate
Biological relevance
: Irrelevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
Synonyms
Formula
2D structure
SO4
Sulfate
1. [so4](2-); 2. Tetraoxidosulfate(2-); 3. So4(2-); 4. Sulphate; 5. Tetraoxosulfate(vi); 6. Sulphate ion; 7. Tetraoxosulfate(2-); 8. Sulfate ion; 9. Sulfuric acid ion(2-); 10. Sulfate anion(2-); 11. Sulfate dianion; 12. Sulfate(2-);
"O4 S"
Binding affinity
Experimental affinity
N/A
Predicted affinity
18.41 mM,
show detail
Software
Raw score
Predicted affinity
90% confidence interval
Xscore
3.56 (log(Ka))
4.04 mM
[1,6.5 uM]
ITScore
-2.452 (kcal/mol)
0.86 mM
[794.33 mM,0.94 uM]
vina
-0.59221 (kcal/mol)
12.02 mM
[1,14.49 uM]
Surface area (A
2
)
Surface area of receptor
2974.64
Surface area of ligand
198.91
Surface area of complex
3065.18
Interface area
54.18
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)