Function Annotation for BL8340




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Receptor

Assembly ID: 1ddt_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author and software
PDB ID: 1ddt
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0 Å
UniProt ID: P00588
PubMed ID: 7833807 8159715

Ligand

Ligand ID: APU
Ligand name: Adenylyl-3'-5'-phospho-uridine-3'-monophosphate
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
APU Adenylyl-3'-5'-phospho-uridine-3'-monophosphate "C19 H25 N7 O15 P2" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity 7.05 nM, show detail

Surface area (A2)

Surface area of receptor 41264.91
Surface area of ligand 761.99
Surface area of complex 40970.3
Interface area 528.3
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)