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Yang Lab
Function Annotation for BL68588
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
E22:
A2 Q3 V4 S5 N25
Residue number in PDB file:
422:
A3 Q4 V5 S6 N26
Receptor
Assembly ID: 3epd_1
Stoichiometry type
: Hetero 300-mer -A60B60C60D60E60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
3epd
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 9.0 Å
Other biological units from the same PDB ID
: 3epd_2,3epd_3,3epd_4,3epd_5
UniProt ID
:
A0A0B4MVN6
P15151
P03302
A0A0B6VQW0
PubMed ID
:
19011098
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
644.52
Surface area of complex(A
2
)
644.52
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)