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Yang Lab
Function Annotation for BL666
3D View
Ligand Information
Binding Information
data_1a1q_2 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 184 C CA . PRO B 1 2 ? -11.908 6.531 18.149 1.00 30.83 ? 2 PRO B CA 1 ATOM 185 C CA . ILE B 1 3 ? -9.563 8.545 15.916 1.00 25.93 ? 3 ILE B CA 1 ATOM 186 C CA . THR B 1 4 ? -6.534 7.919 13.689 1.00 22.43 ? 4 THR B CA 1 ATOM 187 C CA . ALA B 1 5 ? -3.747 10.295 12.715 1.00 21.78 ? 5 ALA B CA 1 ATOM 188 C CA . TYR B 1 6 ? -1.932 9.863 9.445 1.00 23.84 ? 6 TYR B CA 1 ATOM 189 C CA . SER B 1 7 ? 1.329 11.588 8.557 1.00 25.27 ? 7 SER B CA 1 ATOM 190 C CA . GLN B 1 8 ? 2.805 11.369 5.052 1.00 30.36 ? 8 GLN B CA 1 ATOM 191 C CA . GLY B 1 12 ? 1.181 15.128 -1.112 1.00 24.59 ? 12 GLY B CA 1 ATOM 192 C CA . LEU B 1 13 ? 0.123 15.818 2.494 1.00 24.93 ? 13 LEU B CA 1 ATOM 193 C CA . LEU B 1 14 ? 1.676 18.582 4.530 1.00 28.64 ? 14 LEU B CA 1 ATOM 194 C CA . GLY B 1 15 ? 0.945 17.721 8.184 1.00 26.73 ? 15 GLY B CA 1 ATOM 195 C CA . CYS B 1 16 ? -1.128 15.208 10.089 1.00 23.36 ? 16 CYS B CA 1 ATOM 196 C CA . ILE B 1 17 ? -4.576 14.369 8.876 1.00 21.45 ? 17 ILE B CA 1 ATOM 197 C CA . ILE B 1 18 ? -6.725 13.415 11.841 1.00 21.82 ? 18 ILE B CA 1 ATOM 198 C CA . THR B 1 19 ? -9.575 10.981 11.094 1.00 24.60 ? 19 THR B CA 1 ATOM 199 C CA . SER B 1 20 ? -12.163 9.620 13.524 1.00 30.32 ? 20 SER B CA 1 ATOM 200 C CA . LEU B 1 21 ? -13.279 6.041 12.832 1.00 33.48 ? 21 LEU B CA 1 ATOM 201 C CA . THR B 1 22 ? -16.624 6.342 14.642 1.00 35.60 ? 22 THR B CA 1 ATOM 202 C CA . GLN B 1 28 ? -0.433 19.701 -1.002 1.00 31.63 ? 28 GLN B CA 1 ATOM 203 C CA . VAL B 1 29 ? -3.273 19.218 1.526 1.00 29.59 ? 29 VAL B CA 1 ATOM 204 C CA . GLU B 1 30 ? -2.321 20.726 4.857 1.00 27.66 ? 30 GLU B CA 1 ATOM 205 C CA . GLY B 1 31 ? -3.447 18.715 7.832 1.00 23.95 ? 31 GLY B CA 1 ATOM 206 C CA . GLU B 1 32 ? -4.857 19.775 11.172 1.00 18.51 ? 32 GLU B CA 1 ATOM 207 C CA . VAL B 1 33 ? -1.499 19.295 12.841 1.00 13.77 ? 33 VAL B CA 1 ATOM 208 C CA . GLN B 1 34 ? 1.993 20.237 11.626 1.00 17.71 ? 34 GLN B CA 1 ATOM 209 C CA . VAL B 1 35 ? 5.568 20.770 12.669 1.00 17.94 ? 35 VAL B CA 1 ATOM 210 C CA . VAL B 1 36 ? 6.450 24.267 13.801 1.00 21.78 ? 36 VAL B CA 1 ATOM 211 C CA . SER B 1 37 ? 10.142 24.474 14.631 1.00 26.25 ? 37 SER B CA 1 ATOM 212 C CA . THR B 1 38 ? 12.083 27.135 16.504 1.00 31.08 ? 38 THR B CA 1 ATOM 213 C CA . ALA B 1 39 ? 15.855 27.563 17.157 1.00 35.90 ? 39 ALA B CA 1 ATOM 214 C CA . THR B 1 40 ? 16.427 25.126 20.057 1.00 35.92 ? 40 THR B CA 1 ATOM 215 C CA . GLN B 1 41 ? 13.587 22.726 19.121 1.00 30.89 ? 41 GLN B CA 1 ATOM 216 C CA . SER B 1 42 ? 10.420 21.568 17.317 1.00 21.43 ? 42 SER B CA 1 ATOM 217 C CA . PHE B 1 43 ? 6.739 21.435 18.282 1.00 14.13 ? 43 PHE B CA 1 ATOM 218 C CA . LEU B 1 44 ? 3.350 21.017 16.687 1.00 11.27 ? 44 LEU B CA 1 ATOM 219 C CA . ALA B 1 45 ? 0.689 23.547 15.841 1.00 7.52 ? 45 ALA B CA 1 ATOM 220 C CA . THR B 1 46 ? -2.945 22.487 15.903 1.00 11.46 ? 46 THR B CA 1 ATOM 221 C CA . CYS B 1 47 ? -5.633 24.059 13.822 1.00 13.37 ? 47 CYS B CA 1 ATOM 222 C CA . VAL B 1 48 ? -8.871 24.559 15.741 1.00 15.62 ? 48 VAL B CA 1 ATOM 223 C CA . ASN B 1 49 ? -11.362 26.694 13.801 1.00 16.07 ? 49 ASN B CA 1 ATOM 224 C CA . GLY B 1 50 ? -9.022 28.140 11.181 1.00 15.71 ? 50 GLY B CA 1 ATOM 225 C CA . VAL B 1 51 ? -6.391 29.211 13.690 1.00 15.50 ? 51 VAL B CA 1 ATOM 226 C CA . CYS B 1 52 ? -3.050 27.544 14.250 1.00 14.23 ? 52 CYS B CA 1 ATOM 227 C CA . TRP B 1 53 ? -2.062 27.286 17.842 1.00 10.11 ? 53 TRP B CA 1 ATOM 228 C CA . THR B 1 54 ? 1.113 26.065 19.465 1.00 13.65 ? 54 THR B CA 1 ATOM 229 C CA . VAL B 1 55 ? 2.501 26.320 22.957 1.00 19.77 ? 55 VAL B CA 1 ATOM 230 C CA . TYR B 1 56 ? 3.767 29.723 23.993 1.00 23.17 ? 56 TYR B CA 1 ATOM 231 C CA . HIS B 1 57 ? 6.252 27.677 26.045 1.00 35.02 ? 57 HIS B CA 1 ATOM 232 C CA . GLY B 1 58 ? 8.280 26.831 22.983 1.00 36.79 ? 58 GLY B CA 1 ATOM 233 C CA . ALA B 1 59 ? 6.689 28.934 20.291 1.00 42.11 ? 59 ALA B CA 1 ATOM 234 C CA . GLY B 1 60 ? 8.386 32.176 19.355 1.00 43.51 ? 60 GLY B CA 1 ATOM 235 C CA . SER B 1 61 ? 11.247 31.655 21.833 1.00 42.87 ? 61 SER B CA 1 ATOM 236 C CA . LYS B 1 62 ? 13.998 31.445 19.270 1.00 45.41 ? 62 LYS B CA 1 ATOM 237 C CA . THR B 1 63 ? 12.463 31.898 15.736 1.00 40.65 ? 63 THR B CA 1 ATOM 238 C CA . LEU B 1 64 ? 9.495 29.778 14.388 1.00 31.72 ? 64 LEU B CA 1 ATOM 239 C CA . ALA B 1 65 ? 9.362 27.965 11.020 1.00 32.81 ? 65 ALA B CA 1 ATOM 240 C CA . GLY B 1 66 ? 6.671 25.912 9.368 1.00 35.27 ? 66 GLY B CA 1 ATOM 241 C CA . PRO B 1 67 ? 6.307 23.068 6.799 1.00 35.94 ? 67 PRO B CA 1 ATOM 242 C CA . LYS B 1 68 ? 6.434 25.839 4.175 1.00 34.84 ? 68 LYS B CA 1 ATOM 243 C CA . GLY B 1 69 ? 8.248 28.968 5.391 1.00 32.93 ? 69 GLY B CA 1 ATOM 244 C CA . PRO B 1 70 ? 8.679 31.041 8.627 1.00 30.24 ? 70 PRO B CA 1 ATOM 245 C CA . ILE B 1 71 ? 5.514 31.452 10.627 1.00 24.35 ? 71 ILE B CA 1 ATOM 246 C CA . THR B 1 72 ? 4.325 34.943 11.307 1.00 24.42 ? 72 THR B CA 1 ATOM 247 C CA . GLN B 1 73 ? 2.797 34.716 14.722 1.00 22.68 ? 73 GLN B CA 1 ATOM 248 C CA . MET B 1 74 ? -0.170 36.959 15.030 1.00 20.85 ? 74 MET B CA 1 ATOM 249 C CA . TYR B 1 75 ? -0.890 36.909 18.742 1.00 19.54 ? 75 TYR B CA 1 ATOM 250 C CA . THR B 1 76 ? -1.252 34.709 21.880 1.00 17.32 ? 76 THR B CA 1 ATOM 251 C CA . ASN B 1 77 ? -4.498 33.686 23.650 1.00 15.77 ? 77 ASN B CA 1 ATOM 252 C CA . VAL B 1 78 ? -5.705 35.710 26.669 1.00 16.77 ? 78 VAL B CA 1 ATOM 253 C CA . ASP B 1 79 ? -3.992 33.586 29.267 1.00 17.14 ? 79 ASP B CA 1 ATOM 254 C CA . GLN B 1 80 ? -0.779 33.997 27.246 1.00 17.83 ? 80 GLN B CA 1 ATOM 255 C CA . ASP B 1 81 ? -0.596 30.183 27.241 1.00 12.48 ? 81 ASP B CA 1 ATOM 256 C CA . LEU B 1 82 ? -0.656 29.678 23.516 1.00 14.62 ? 82 LEU B CA 1 ATOM 257 C CA . VAL B 1 83 ? 0.711 31.447 20.437 1.00 17.91 ? 83 VAL B CA 1 ATOM 258 C CA . GLY B 1 84 ? -1.315 31.372 17.232 1.00 15.28 ? 84 GLY B CA 1 ATOM 259 C CA . TRP B 1 85 ? -2.093 32.838 13.793 1.00 15.51 ? 85 TRP B CA 1 ATOM 260 C CA . GLN B 1 86 ? -4.804 32.587 11.167 1.00 20.46 ? 86 GLN B CA 1 ATOM 261 C CA . ALA B 1 87 ? -4.633 29.379 9.149 1.00 21.98 ? 87 ALA B CA 1 ATOM 262 C CA . PRO B 1 88 ? -3.845 29.340 5.377 1.00 30.26 ? 88 PRO B CA 1 ATOM 263 C CA . PRO B 1 89 ? -7.028 29.574 3.277 1.00 32.98 ? 89 PRO B CA 1 ATOM 264 C CA . GLY B 1 90 ? -8.142 26.014 2.585 1.00 34.05 ? 90 GLY B CA 1 ATOM 265 C CA . ALA B 1 91 ? -6.341 24.509 5.627 1.00 29.53 ? 91 ALA B CA 1 ATOM 266 C CA . ARG B 1 92 ? -8.070 21.620 7.501 1.00 23.44 ? 92 ARG B CA 1 ATOM 267 C CA . SER B 1 93 ? -9.307 22.463 10.995 1.00 20.93 ? 93 SER B CA 1 ATOM 268 C CA . LEU B 1 94 ? -10.593 20.717 14.078 1.00 18.89 ? 94 LEU B CA 1 ATOM 269 C CA . THR B 1 95 ? -13.716 22.042 15.821 1.00 18.36 ? 95 THR B CA 1 ATOM 270 C CA . PRO B 1 96 ? -13.722 22.417 19.587 1.00 21.45 ? 96 PRO B CA 1 ATOM 271 C CA . CYS B 1 97 ? -15.414 19.548 21.424 1.00 22.43 ? 97 CYS B CA 1 ATOM 272 C CA . THR B 1 98 ? -18.963 20.246 22.524 1.00 28.87 ? 98 THR B CA 1 ATOM 273 C CA . CYS B 1 99 ? -19.960 17.033 24.183 1.00 29.31 ? 99 CYS B CA 1 ATOM 274 C CA . GLY B 1 100 ? -18.181 16.586 27.494 1.00 26.44 ? 100 GLY B CA 1 ATOM 275 C CA . SER B 1 101 ? -16.134 13.451 26.985 1.00 18.98 ? 101 SER B CA 1 ATOM 276 C CA . SER B 1 102 ? -13.389 12.700 29.463 1.00 12.06 ? 102 SER B CA 1 ATOM 277 C CA . ASP B 1 103 ? -11.886 10.146 27.106 1.00 14.64 ? 103 ASP B CA 1 ATOM 278 C CA . LEU B 1 104 ? -9.066 11.964 25.288 1.00 16.06 ? 104 LEU B CA 1 ATOM 279 C CA . TYR B 1 105 ? -6.651 10.906 22.559 1.00 13.45 ? 105 TYR B CA 1 ATOM 280 C CA . LEU B 1 106 ? -3.311 12.657 22.066 1.00 13.02 ? 106 LEU B CA 1 ATOM 281 C CA . VAL B 1 107 ? -2.001 12.904 18.544 1.00 14.82 ? 107 VAL B CA 1 ATOM 282 C CA . THR B 1 108 ? 1.810 12.727 18.572 1.00 14.29 ? 108 THR B CA 1 ATOM 283 C CA . ARG B 1 109 ? 4.392 14.265 16.139 1.00 13.82 ? 109 ARG B CA 1 ATOM 284 C CA . HIS B 1 110 ? 5.075 10.669 15.090 1.00 16.86 ? 110 HIS B CA 1 ATOM 285 C CA . ALA B 1 111 ? 1.353 10.375 14.327 1.00 14.88 ? 111 ALA B CA 1 ATOM 286 C CA . ASP B 1 112 ? 0.507 7.956 17.142 1.00 17.27 ? 112 ASP B CA 1 ATOM 287 C CA . VAL B 1 113 ? -2.674 8.423 19.212 1.00 13.50 ? 113 VAL B CA 1 ATOM 288 C CA . ILE B 1 114 ? -2.140 8.100 23.002 1.00 11.08 ? 114 ILE B CA 1 ATOM 289 C CA . PRO B 1 115 ? -5.329 7.559 25.005 1.00 7.62 ? 115 PRO B CA 1 ATOM 290 C CA . VAL B 1 116 ? -5.629 10.025 27.874 1.00 7.78 ? 116 VAL B CA 1 ATOM 291 C CA . ARG B 1 117 ? -8.338 10.158 30.507 1.00 9.11 ? 117 ARG B CA 1 ATOM 292 C CA . ARG B 1 118 ? -9.360 13.676 31.631 1.00 8.19 ? 118 ARG B CA 1 ATOM 293 C CA . ARG B 1 119 ? -8.703 14.327 35.331 1.00 11.13 ? 119 ARG B CA 1 ATOM 294 C CA . GLY B 1 120 ? -9.155 18.136 35.360 1.00 14.90 ? 120 GLY B CA 1 ATOM 295 C CA . ASP B 1 121 ? -9.566 21.159 33.107 1.00 14.73 ? 121 ASP B CA 1 ATOM 296 C CA . SER B 1 122 ? -5.959 21.037 32.031 1.00 10.15 ? 122 SER B CA 1 ATOM 297 C CA . ARG B 1 123 ? -4.921 17.614 33.214 1.00 9.60 ? 123 ARG B CA 1 ATOM 298 C CA . GLY B 1 124 ? -4.960 14.112 31.884 1.00 10.69 ? 124 GLY B CA 1 ATOM 299 C CA . SER B 1 125 ? -3.471 10.810 32.940 1.00 10.85 ? 125 SER B CA 1 ATOM 300 C CA . LEU B 1 126 ? -2.081 8.531 30.326 1.00 10.54 ? 126 LEU B CA 1 ATOM 301 C CA . LEU B 1 127 ? -3.699 5.139 30.388 1.00 13.41 ? 127 LEU B CA 1 ATOM 302 C CA . SER B 1 128 ? -0.233 3.715 29.608 1.00 18.68 ? 128 SER B CA 1 ATOM 303 C CA . PRO B 1 129 ? 3.054 5.440 30.717 1.00 10.71 ? 129 PRO B CA 1 ATOM 304 C CA . ARG B 1 130 ? 4.947 6.775 27.689 1.00 8.97 ? 130 ARG B CA 1 ATOM 305 C CA . PRO B 1 131 ? 8.660 7.354 27.210 1.00 11.66 ? 131 PRO B CA 1 ATOM 306 C CA . VAL B 1 132 ? 9.630 11.008 27.412 1.00 17.34 ? 132 VAL B CA 1 ATOM 307 C CA . SER B 1 133 ? 11.700 10.749 24.170 1.00 17.54 ? 133 SER B CA 1 ATOM 308 C CA . TYR B 1 134 ? 8.363 9.952 22.603 1.00 19.52 ? 134 TYR B CA 1 ATOM 309 C CA . LEU B 1 135 ? 6.339 13.065 23.516 1.00 17.96 ? 135 LEU B CA 1 ATOM 310 C CA . LYS B 1 136 ? 9.455 15.168 22.852 1.00 18.33 ? 136 LYS B CA 1 ATOM 311 C CA . GLY B 1 137 ? 8.542 17.570 20.036 1.00 14.60 ? 137 GLY B CA 1 ATOM 312 C CA . SER B 1 138 ? 4.801 17.013 20.343 1.00 13.31 ? 138 SER B CA 1 ATOM 313 C CA . SER B 1 139 ? 3.979 20.078 22.465 1.00 13.00 ? 139 SER B CA 1 ATOM 314 C CA . GLY B 1 140 ? 1.160 21.815 20.681 1.00 9.93 ? 140 GLY B CA 1 ATOM 315 C CA . GLY B 1 141 ? -0.293 18.477 19.552 1.00 12.82 ? 141 GLY B CA 1 ATOM 316 C CA . PRO B 1 142 ? -4.071 18.056 20.000 1.00 11.07 ? 142 PRO B CA 1 ATOM 317 C CA . LEU B 1 143 ? -5.968 16.191 22.661 1.00 9.37 ? 143 LEU B CA 1 ATOM 318 C CA . LEU B 1 144 ? -9.257 15.157 21.102 1.00 11.52 ? 144 LEU B CA 1 ATOM 319 C CA . CYS B 1 145 ? -12.471 13.576 22.246 1.00 13.19 ? 145 CYS B CA 1 ATOM 320 C CA . PRO B 1 146 ? -13.852 10.269 20.865 1.00 17.80 ? 146 PRO B CA 1 ATOM 321 C CA . SER B 1 147 ? -15.674 12.002 17.952 1.00 17.74 ? 147 SER B CA 1 ATOM 322 C CA . GLY B 1 148 ? -12.508 13.690 16.716 1.00 19.67 ? 148 GLY B CA 1 ATOM 323 C CA . HIS B 1 149 ? -13.084 17.135 18.246 1.00 16.91 ? 149 HIS B CA 1 ATOM 324 C CA . ALA B 1 150 ? -10.395 19.192 19.916 1.00 13.20 ? 150 ALA B CA 1 ATOM 325 C CA . VAL B 1 151 ? -10.391 19.347 23.692 1.00 10.82 ? 151 VAL B CA 1 ATOM 326 C CA . GLY B 1 152 ? -6.945 20.761 24.429 1.00 8.46 ? 152 GLY B CA 1 ATOM 327 C CA . ILE B 1 153 ? -3.378 21.553 23.321 1.00 9.63 ? 153 ILE B CA 1 ATOM 328 C CA . PHE B 1 154 ? -0.681 19.354 24.836 1.00 9.61 ? 154 PHE B CA 1 ATOM 329 C CA . ARG B 1 155 ? 1.698 21.311 27.021 1.00 11.19 ? 155 ARG B CA 1 ATOM 330 C CA . ALA B 1 156 ? 3.861 19.122 29.166 1.00 10.11 ? 156 ALA B CA 1 ATOM 331 C CA . ALA B 1 157 ? 4.228 15.675 30.626 1.00 8.40 ? 157 ALA B CA 1 ATOM 332 C CA . VAL B 1 158 ? 4.156 14.924 34.338 1.00 9.06 ? 158 VAL B CA 1 ATOM 333 C CA . CYS B 1 159 ? 6.659 12.220 35.067 1.00 11.10 ? 159 CYS B CA 1 ATOM 334 C CA . THR B 1 160 ? 7.112 9.560 37.638 1.00 14.87 ? 160 THR B CA 1 ATOM 335 C CA . ARG B 1 161 ? 9.967 7.039 37.699 1.00 14.11 ? 161 ARG B CA 1 ATOM 336 C CA . GLY B 1 162 ? 11.505 8.576 34.616 1.00 10.83 ? 162 GLY B CA 1 ATOM 337 C CA . VAL B 1 163 ? 8.473 7.786 32.488 1.00 11.69 ? 163 VAL B CA 1 ATOM 338 C CA . ALA B 1 164 ? 5.596 10.105 31.583 1.00 7.81 ? 164 ALA B CA 1 ATOM 339 C CA . LYS B 1 165 ? 2.422 9.369 33.527 1.00 9.36 ? 165 LYS B CA 1 ATOM 340 C CA . ALA B 1 166 ? 0.073 12.383 33.195 1.00 10.43 ? 166 ALA B CA 1 ATOM 341 C CA . VAL B 1 167 ? -0.233 15.226 30.738 1.00 9.20 ? 167 VAL B CA 1 ATOM 342 C CA . ASP B 1 168 ? -0.749 18.970 31.413 1.00 9.40 ? 168 ASP B CA 1 ATOM 343 C CA . PHE B 1 169 ? -2.671 20.769 28.682 1.00 12.05 ? 169 PHE B CA 1 ATOM 344 C CA . VAL B 1 170 ? -4.384 24.028 27.676 1.00 10.09 ? 170 VAL B CA 1 ATOM 345 C CA . PRO B 1 171 ? -8.160 23.548 27.296 1.00 10.15 ? 171 PRO B CA 1 ATOM 346 C CA . VAL B 1 172 ? -9.537 24.603 23.890 1.00 16.51 ? 172 VAL B CA 1 ATOM 347 C CA . GLU B 1 173 ? -11.988 26.837 25.780 1.00 22.90 ? 173 GLU B CA 1 ATOM 348 C CA . SER B 1 174 ? -8.951 29.100 26.282 1.00 23.43 ? 174 SER B CA 1 ATOM 349 C CA . MET B 1 175 ? -8.779 29.929 22.588 1.00 21.45 ? 175 MET B CA 1 ATOM 350 C CA . GLU B 1 176 ? -11.893 32.157 22.783 1.00 26.22 ? 176 GLU B CA 1 ATOM 351 C CA . THR B 1 177 ? -11.388 35.535 24.496 1.00 31.57 ? 177 THR B CA 1 ATOM 352 C CA . THR B 1 178 ? -14.747 37.003 25.608 1.00 37.60 ? 178 THR B CA 1 ATOM 353 C CA . MET B 1 179 ? -14.856 40.692 26.579 1.00 38.46 ? 179 MET B CA 1 HETATM 533 ZN ZN . ZN E 2 . ? -16.533 15.747 21.794 1.00 27.17 ? 901 ZN B ZN 1
Spin
Binding residue
Receptor
Assembly ID: 1a1q_2
Stoichiometry type
: Monomer -A1
Assembly defined by
: Author
PDB ID
:
1a1q
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.4 Å
UniProt ID
:
P26663
PubMed ID
:
8861916
Ligand
Ligand ID
:
ZN
Ligand name
: Zinc(2+)
Biological relevance
: Irrelevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
Synonyms
Formula
2D structure
ZN
Zinc(2+)
1. Zn(2+); 2. Zinc(ii) cation; 3. Zinc, ion (zn2+); 4. Zinc ion; 5. Zinc(2+) ion; 6. Zn2+; 7. Zinc cation; 8. Zn(ii);
Zn
Binding affinity
Experimental affinity
N/A
Predicted affinity
N/A,
show detail
Software
Raw score
Predicted affinity
90% confidence interval
Xscore
N/A (log(Ka))
28.05 pM
[17.38 nM,45.0 fM]
ITScore
N/A (kcal/mol)
5.43 pM
[5.42 nM,5.4 fM]
vina
N/A (kcal/mol)
0.76 uM
[0.55 mM,1.04 nM]
Surface area (A
2
)
Surface area of receptor
9224.88
Surface area of ligand
24.63
Surface area of complex
9236.85
Interface area
6.33
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)