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Yang Lab
Function Annotation for BL5544
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B25:
C270 P271
B28:
S23 R72 S73 E74 S76 E78 S79 A82 R83 K262
B29:
A43 L44 V47
B42:
F124 P274
B43:
Y302
C13:
Y9 S10 D11 R12 V13 L14 Q15 N30
C25:
Y35 G36 A190 F191 V192 F193 P194 H195
C29:
I197
C42:
N189
C50:
A6 C7
D21:
H77 R145 Q195 T196
D25:
I49
D28:
A16 D17 N18 K41 N42
D29:
T51 M52 I53 F55 Y68 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
D30:
K146
D42:
P89 A90 L95 S96 H97 T98 M99 L100 G101 E102 I103 L104 N105 Y107 H109 W110 A111 Y176 R177 Q178 T179 F220 S221 V222 R223 H230
D43:
D79 D80 P81 S133 Y134 A135 P136 P141 P142 K143 K144 R145 K146 E147 A148 T152 V168 G187 G188 Y189 I190 S191 F193
E12:
G1 A2 Q3 V4 S5
E13:
K57 D58 V59 L60 I61 P65 M66 L67
E24:
S22 T23 I24 N25
E25:
D48 S50 K51 F52 P55
E27:
E13
E28:
A40 K42 D44 F45 S46
Residue number in PDB file:
125:
C270 P271
128:
S23 R72 S73 E74 S76 E78 S79 A82 R83 K262
129:
A43 L44 V47
142:
F124 P274
143:
Y302
213:
Y9 S10 D11 R12 V13 L14 Q15 N30
225:
Y35 G36 A190 F191 V192 F193 P194 H195
229:
I197
242:
N189
250:
A6 C7
321:
H77 R145 Q195 T196
325:
I49
328:
A16 D17 N18 K41 N42
329:
T51 M52 I53 F55 Y68 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
330:
K146
342:
P89 A90 L95 S96 H97 T98 M99 L100 G101 E102 I103 L104 N105 Y107 H109 W110 A111 Y176 R177 Q178 T179 F220 S221 V222 R223 H230
343:
D79 D80 P81 S133 Y134 A135 P136 P141 P142 K143 K144 R145 K146 E147 A148 T152 V168 G187 G188 Y189 I190 S191 F193
412:
G2 A3 Q4 V5 S6
413:
K58 D59 V60 L61 I62 P66 M67 L68
424:
S23 T24 I25 N26
425:
D49 S51 K52 F53 P56
427:
E14
428:
A41 K43 D45 F46 S47
Receptor
Assembly ID: 1ar8_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar8
Experimental method
: X-RAY DIFFRACTION
Resolution
: N/A
Other biological units from the same PDB ID
: 1ar8_1,1ar8_2,1ar8_3,1ar8_4,1ar8_5
UniProt ID
:
P03300
PubMed ID
:
9253417
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)