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Yang Lab
Function Annotation for BL5517
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B26:
A43 L44 V47
B30:
S23 R72 S73 E74 S76 E78 S79 A82 R83 K262
C24:
Y9 S10 D11 R12 V13 L14 Q15 N30
C26:
I197
D26:
T51 M52 I53 F55 Y68 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
D27:
K146
D30:
A16 D17 N18 K41 N42
E23:
G1 A2 Q3 V4 S5
E24:
K57 D58 V59 L60 I61 P65 M66 L67
E29:
E13
E30:
A40 K42 D44 F45 S46
Residue number in PDB file:
126:
A43 L44 V47
130:
S23 R72 S73 E74 S76 E78 S79 A82 R83 K262
224:
Y9 S10 D11 R12 V13 L14 Q15 N30
226:
I197
326:
T51 M52 I53 F55 Y68 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
327:
K146
330:
A16 D17 N18 K41 N42
423:
G2 A3 Q4 V5 S6
424:
K58 D59 V60 L61 I62 P66 M67 L68
429:
E14
430:
A41 K43 D45 F46 S47
Receptor
Assembly ID: 1ar8_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar8
Experimental method
: X-RAY DIFFRACTION
Resolution
: N/A
Other biological units from the same PDB ID
: 1ar8_1,1ar8_2,1ar8_3,1ar8_4,1ar8_5
UniProt ID
:
P03300
PubMed ID
:
9253417
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)