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Yang Lab
Function Annotation for BL53393
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A16:
N5 E9 V14 L15 D63 E68 D122 I184 P185 K244 H245
A17:
V10
C16:
D18 Q20 S21 C23 P26 W27
C17:
M19
C18:
L2
C19:
G1
C20:
W27
Residue number in PDB file:
116:
N5 E9 V14 L15 D63 E68 D122 I184 P185 K244 H245
117:
V10
316:
D18 Q20 S21 C23 P26 W27
317:
M19
318:
L2
319:
G1
320:
W27
Receptor
Assembly ID: 2hwd_1
Stoichiometry type
: Hetero 180-mer -A60B60C60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
2hwd
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.8 Å
Other biological units from the same PDB ID
: 2hwd_2,2hwd_3,2hwd_4,2hwd_5,2hwd_6
UniProt ID
:
P23008
PubMed ID
:
8383771
1847215
2555523
3018924
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)