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Yang Lab
Function Annotation for BL43722
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A36:
A271 V272 A285 I286
B36:
Y179 L186
C40:
P54 M55 N56 A57 V58 D59 V62 N63 M67 P71 P80 I81 F82 C83 L84 S85 K92 R93 H96 P140 P141 F188
Residue number in PDB file:
136:
A271 V272 A285 I286
236:
Y179 L186
340:
P54 M55 N56 A57 V58 D59 V62 N63 M67 P71 P80 I81 F82 C83 L84 S85 K92 R93 H96 P140 P141 F188
Receptor
Assembly ID: 1z7z_1
Stoichiometry type
: Hetero 238-mer -A60B60C59D59
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1z7z
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 8.0 Å
Other biological units from the same PDB ID
: 1z7z_2,1z7z_3,1z7z_4,1z7z_5
UniProt ID
:
P22055
Q7T7N6
P05362
PubMed ID
:
16004874
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
1726.71
Surface area of complex(A
2
)
1726.71
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)