Function Annotation for BL420




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Receptor

Assembly ID: 1akc_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author and software
PDB ID: 1akc
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
UniProt ID: P00508
PubMed ID: 7819232

Ligand

Ligand ID: PPE
Ligand name: Pyridoxyl-glutamic acid-5'-monophosphate
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
PPE Pyridoxyl-glutamic acid-5'-monophosphate "C13 H20 N2 O9 P" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity 17.62 nM, show detail

Surface area (A2)

Surface area of receptor 29747.01
Surface area of ligand 523.86
Surface area of complex 29552.93
Interface area 358.97
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)