Function Annotation for BL3608




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Receptor

Assembly ID: 1b5q_1

Stoichiometry type: Homo 6-mer -A6
Assembly defined by: Software
PDB ID: 1b5q
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
UniProt ID: O64411
PubMed ID: 10368296

Ligand

Ligand ID : 5-mer (NAG,NAG,MAN,MAN,FCA)
Ligand name: K connected small molecules
Biological relevance: Relevant

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Ligand ID Name Synonyms Formula 2D structure
NAG Aldehydo-n-acetyl-d-glucosamine "C8 H15 N O6" N/A
NAG Aldehydo-n-acetyl-d-glucosamine "C8 H15 N O6" N/A
MAN Alpha-d-mannose "C6 H12 O6" N/A
MAN Alpha-d-mannose "C6 H12 O6" N/A
FCA Alpha-d-fucose "C6 H12 O5" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity N/A, show detail

Surface area (A2)

Surface area of receptor N/A
Surface area of ligand 1028.23
Surface area of complex 99176.5
Interface area N/A
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)