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Yang Lab
Function Annotation for BL35099
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A14:
D63 S66 E68 K240 H241
C12:
L2 P3
C14:
D18 Q20 S21 P22 C23 P26 W27
C15:
F19
Residue number in PDB file:
114:
D63 S66 E68 K240 H241
312:
L2 P3
314:
D18 Q20 S21 P22 C23 P26 W27
315:
F19
Receptor
Assembly ID: 1v9u_1
Stoichiometry type
: Hetero 240-mer -A60B60C60D60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1v9u
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.6 Å
Other biological units from the same PDB ID
: 1v9u_2,1v9u_3,1v9u_4,1v9u_5,1v9u_6
UniProt ID
:
P04936
P98155
PubMed ID
:
15064754
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)