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Yang Lab
Function Annotation for BL29712
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A22:
N5 E9 V14 L15 D63 E68 D122 S183 P185 K244 H245
A23:
V10
C22:
D18 Q20 S21 C23 P26 W27
C23:
M19
C24:
L2
C25:
G1 L2
Residue number in PDB file:
122:
N5 E9 V14 L15 D63 E68 D122 S183 P185 K244 H245
123:
V10
322:
D18 Q20 S21 C23 P26 W27
323:
M19
324:
L2
325:
G1 L2
Receptor
Assembly ID: 1r1a_1
Stoichiometry type
: Hetero 180-mer -A60B60C60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1r1a
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.2 Å
Other biological units from the same PDB ID
: 1r1a_2,1r1a_3,1r1a_4,1r1a_5,1r1a_6
UniProt ID
:
P23008
PubMed ID
:
2555523
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)