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Yang Lab
Function Annotation for BL27495
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A36:
L126 A127 T128 A129 Y130 G132 T157 S158 F159
A37:
P204 A205 K206 Q207
C36:
H172
D36:
S31 S32 H34 F36 E97
E36:
T50 S53 Y57 Y59 R99 E100 D101 G102 G103
Residue number in PDB file:
136:
L126 A127 T128 A129 Y130 G132 T161 S162 F163
137:
P208 A209 K210 Q211
336:
H173
436:
S31 S32 H34 F36 E97
A36:
T50 S53 Y57 Y59 R99 E100 D101 G102 G103
Receptor
Assembly ID: 1qgc_1
Stoichiometry type
: Hetero 300-mer -A60B60C60D60E60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1qgc
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 30.0 Å
Other biological units from the same PDB ID
: 1qgc_2,1qgc_3,1qgc_4,1qgc_5
UniProt ID
:
P15072
P01837
P03311
PubMed ID
:
9130694
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
1867.85
Surface area of complex(A
2
)
1867.85
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)