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Yang Lab
Function Annotation for BL250044
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A6:
L58 E60 N61 S64 D116 T183 P185 K244 H245
B10:
P26 C27
B6:
D18 S20 S21 A22 P23 L25 P26 C27 F28
B7:
D18
B8:
P3 Y5
B9:
G1 V2 P3
Residue number in PDB file:
A6:
L58 E60 N61 S64 D116 T183 P185 K244 H245
B10:
P26 C27
B6:
D18 S20 S21 A22 P23 L25 P26 C27 F28
B7:
D18
B8:
P3 Y5
B9:
G1 V2 P3
Receptor
Assembly ID: 6crp_1
Stoichiometry type
: Hetero 180-mer -A60B60C60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
6crp
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.24 Å
Other biological units from the same PDB ID
: 6crp_2,6crp_3,6crp_4,6crp_5
UniProt ID
:
A0A097BW12
PubMed ID
:
30530701
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
2333.14
Surface area of complex(A
2
)
2333.14
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)