Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL244996
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue number in mmCIF file:
D17:
L372 S376 N644 Y646 L647 S648 R676 L870 R872 A884 E921 V922 F923
E17:
A20 S21 L24 E36 L41 N42 R46 N47 T49
X17:
R104 E105 E106 T107
Residue number in PDB file:
D17:
L372 S376 N644 Y646 L647 S648 R676 L870 R872 A884 E921 V922 F923
E17:
A20 S21 L24 E36 L41 N42 R46 N47 T49
X17:
R137 E138 E139 T140
Receptor
Assembly ID: 6b1t_1
Stoichiometry type
: Hetero 1260-mer -A720B240C120D60E60F60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
6b1t
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.2 Å
Other biological units from the same PDB ID
: 6b1t_2,6b1t_3,6b1t_4,6b1t_5
UniProt ID
:
P24936
P03281
P68951
P04133
P24937
P12537
P12538
PubMed ID
:
28978703
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
1585.58
Surface area of complex(A
2
)
1585.58
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)