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Yang Lab
Function Annotation for BL233495
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B2:
Q270 P272
C2:
P272 G277 A278
D2:
P272
Residue number in PDB file:
A2:
Q335 P337
B2:
P337 G342 A343
C2:
P337
Receptor
Assembly ID: 5vf3_3
Stoichiometry type
: Hetero 120-mer -A60B55C5
Assembly defined by
: icosahedral pentamer
PDB ID
:
5vf3
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.3 Å
Other biological units from the same PDB ID
: 5vf3_1,5vf3_2,5vf3_4,5vf3_5
UniProt ID
:
P18056
P19896
P04535
P03715
PubMed ID
:
28893988
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
2766.61
Surface area of complex(A
2
)
2766.61
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)