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Yang Lab
Function Annotation for BL220606
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A39:
E76 D129 P195 K263
C37:
G1 L2
C39:
N18 Q20 S21 P22 C23 E27
C40:
Y19
Residue number in PDB file:
139:
E76 D129 P195 K263
337:
G1 L2
339:
N18 Q20 S21 P22 C23 E27
340:
Y19
Receptor
Assembly ID: 5o5p_1
Stoichiometry type
: Hetero 180-mer -A60B60C60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
5o5p
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.1 Å
Other biological units from the same PDB ID
: 5o5p_2,5o5p_3,5o5p_4,5o5p_5
UniProt ID
:
P03302
Q84895
PubMed ID
:
28811473
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
2174.36
Surface area of complex(A
2
)
2174.36
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)