Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL18656
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue number in mmCIF file:
A59:
I61 D62 F68 Y135 F136 A138 P139 W140 C164 K167 N168 I169 A172 L174 T210 Y211 F212 Q214 R215 W244 R291 P293 I350 H355 D357
A60:
I12 D14 S16 H17 L18 T268 Q410 R412 V424 R425 I428
Residue number in PDB file:
F59:
I61 D62 F68 Y135 F136 A138 P139 W140 C164 K167 N168 I169 A172 L174 T210 Y211 F212 Q214 R215 W244 R291 P293 I350 H355 D357
F60:
I12 D14 S16 H17 L18 T268 Q410 R412 V424 R425 I428
Receptor
Assembly ID: 1m06_1
Stoichiometry type
: Hetero 120-mer -A60B60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1m06
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.5 Å
Other biological units from the same PDB ID
: 1m06_2,1m06_3,1m06_4,1m06_5,1m06_6
UniProt ID
:
P69548
P08767
P31281
PubMed ID
:
12473449
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)