Function Annotation for BL12689



                                                                                          Spin

Receptor

Assembly ID: 1by4_2

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author
PDB ID: 1by4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
UniProt ID: P19793
PubMed ID: 10669605

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

Download

  

Ligand ID NUC pairing details Name
DNA C:DNA D:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=350nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 10737.37
Surface area of ligand 5846.9
Surface area of complex 13818.48
Interface area 1382.9

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)