Function Annotation for BL12683



                                                                                          Spin

Receptor

Assembly ID: 1by4_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author
PDB ID: 1by4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
UniProt ID: P19793
PubMed ID: 10669605

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA A:DNA B:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=350nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 11184.16
Surface area of ligand 5603.6
Surface area of complex 13846.86
Interface area 1470.45

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)