Information for ligand XPG

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sdf, pdb, mol, mol2


Ligand Name: 7-[(1r,3r)-3-hydroxy-2-[(1e,3s)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid


Synonyms

1 (13e)-(15s)-11alpha,15-dihydroxy-9-oxoprost-13-enoate
2 Prostaglandin e1
3 Alprostadil
4 (13e,15s)-11alpha,15-dihydroxy-9-oxoprost-13-en-1-oic acid
5 Pge1
6 11alpha,15alpha-dihydroxy-9-oxo-13-trans-prostenoic acid
7 Pge-1
8 Befar
9 Edex
10 Alprostadilum
11 Muse
12 Prostin vr
13 (11alpha,13e,15s)-11,15-dihydroxy-9-oxoprost-13-en-1-oic acid
14 Caverject

Chemical Component Summary

Formula "C20 H34 O5"
Molecular Weight 354.481
SMILES CCCCC[C@H](O)C=C[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(O)=O
InchI InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h12-13,15-17,19,21,23H,2-11,14H2,1H3,(H,24,25)/b13-12+/t15-,16+,17+,19+/m0/s1
InChIkey GMVPRGQOIOIIMI-DWKJAMRDSA-N
DrugBank Reference DB00770
ChEBI Reference 15544
PubChem Reference 5280723
FDA approved drug yes

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)