COACH-Q

User guide

1. Introduction

COACH-Q is an algorithm for quaternary structure-based ligand-binding site prediction using templates from BioLiP2. It first recognizes ligand-binding templates from BioLiP2 based on the alignment of both global structure and binding-specific substructures. The binding information from the detected templates is then transferred to the query structure based on the alignment. Benchmark tests show that COACH-Q is about 40 times faster and 6.5% more accurate than COACH-D . Sequence input is not accepted currently, due to the difficulty of protein-protein complex structure prediction. Both monomer structures and biological unit structures are supported.

2.Submit to COACH-Q

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3.Download results

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Reference:

Hong Wei, Wenkai Wang, Zhenling Peng and Jianyi Yang. Q-BioLiP: a comprehensive resource for quaternary structure-based protein-ligand interactions, In preparation, 2023.